| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3575 |
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| Symbol | |
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| ID | 5871366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3973930 |
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| End bp | 3975243 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641548696 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001669802 |
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| Protein GI | 167034571 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.314754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.535313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATTG CGAATGCAAC CACGGTCCAC AGTGACATCG ACCATGGCAC GAAAGCGCTG
TACAGCAAGA TCACCTGGAG GCTCATCCCC TTCCTGTGCT TCTGCTACCT CGCAGCTTAT
CTGGACCGCA TCAACGTCGG CTTCGCCAAG CTGCAGATGC TCGAAGACTT GCAGTTCAGC
ACAGCGGCCT ATGGCCTGGG TGCCGGGCTG TTCTTCGTCG GCTACATCAT CTTCGAGGTG
CCGAGCAACC TGATCCTGCA GCGCGTTGGC GCCAAGCTGT GGATCGCCCG CATCATGATC
ACCTGGGGCC TGCTGTCGGC GTGCACCATG TTCGTCACCA GCACCACCCA GTTCTATATC
CTGCGTTTCC TGCTGGGTGC GGCCGAGGCC GGCTTCCTGC CCGGCGTGCT GTTCTACCTG
ACCATGTGGT ACCCCACCTA CCGGCGCGGG CGCATCATTG CCTTGTTCAT GATCGGGCTG
CCCTTGTCGA GCGTGATCGG CGGGCCGATT TCTGGCTGGA TCATGGGGCA TTTCGACCAG
GTTCACGGTT TGCACGGCTG GCAGTGGCTG TTCCTGCTGG AGGCGATCCC CAGCGTTTTG
CTTGGCATCC TCACGTTCTG GGCATTGCCT AACCATTTCC AGCAGGCCAA GTGGCTGTCG
GTTGACGACA AGGCACAATT GGCGGCGGAC CTGGCGGCTG ATGATGCTGA GGGCAAGGAC
AGCAAGCACA GCTTCCGCGA TGGCTTCTTC AACCTGAAGG TGTGGATGCT CGGGGGTATC
GACTTTTCGA TCCTGCTCAG TGCCTATGCC ATGGGCTTCT GGATGCCGAC CTTCATCCGT
GATGCGGGCG TCAGCGACAC TTTCCATATC GGCCTGCTCA CAGCCATTCC GAGCCTGGCT
GCACTGGCCG GCATGCTGAT GATCGGGGCC AGCTCCGACC GCCATCGCGA ACGCCGCTGG
CACATCATCG TGCCGTTCAT CATCGGTGCA ATCGCCATGG CCAGCAGCAC CATGTTCAGC
CACAACCTGG TGATGACCGT GGTGTTGTTC GCCATTGCCT CGGCAGCGAT CATTGGCGCG
GTGCCGGTGT TCTTCAGCCT GCCGGCGACC TTCCTCAAAG GCACTGCTGC CGCCACTGGC
TTTGCCCTGG CCTGCTCGGT GGCCAACATC GCCGGCCTGG TGAGCAACTC ACTGATGGGC
GTGGTCACCG ACCTCACCGG TACCTCGCAC GCTGCCCTGT GGGTGTTTGC CGGCTGCCTG
ATCCTCAGCT GCTTCCTGGT CATCGCCTTG CCGGCGAAGC TGGTCAACCG CTAG
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| Protein sequence | MPIANATTVH SDIDHGTKAL YSKITWRLIP FLCFCYLAAY LDRINVGFAK LQMLEDLQFS
TAAYGLGAGL FFVGYIIFEV PSNLILQRVG AKLWIARIMI TWGLLSACTM FVTSTTQFYI
LRFLLGAAEA GFLPGVLFYL TMWYPTYRRG RIIALFMIGL PLSSVIGGPI SGWIMGHFDQ
VHGLHGWQWL FLLEAIPSVL LGILTFWALP NHFQQAKWLS VDDKAQLAAD LAADDAEGKD
SKHSFRDGFF NLKVWMLGGI DFSILLSAYA MGFWMPTFIR DAGVSDTFHI GLLTAIPSLA
ALAGMLMIGA SSDRHRERRW HIIVPFIIGA IAMASSTMFS HNLVMTVVLF AIASAAIIGA
VPVFFSLPAT FLKGTAAATG FALACSVANI AGLVSNSLMG VVTDLTGTSH AALWVFAGCL
ILSCFLVIAL PAKLVNR
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