Gene PputGB1_3572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3572 
Symbol 
ID5871363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3970896 
End bp3971936 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content65% 
IMG OID641548693 
Productalpha/beta hydrolase fold 
Protein accessionYP_001669799 
Protein GI167034568 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000126926 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.752327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCC ATCACTCGAC CACCACCCCG CCACGCCGTT CCCGCCATAC CCTGCTTGCC 
TGCGCCCTGT TGCCGCTTGG GCTGATGGCC GTGAACCTCG CCACCGCTGC ACCCGCGCAG
CCCGAGGCAG CAGTGGTGGC AGACAACTTC GGCCCGCTGA AACACATAAA CGCTGGCGTG
CTCGACGTGT CCTACGTGGA GCAAGGTCCA GCCGATGGCC CGGTAGTGAT CCTGCTGCAT
GGCTGGCCCT ATGACATTCA CAGCTTTGAG CAAGTTGCAC CTGACCTGGC GGCAAAAGGG
TACCGAGTGT TGGTGCCCTA CGTGCGCGGC TACGGCCAGA CCCGCTTCCT GTCCGCGCAA
ACGCCACGCA ATGCCCAGCC CACGGCGCTG GCCAGCGATG TCATTGCGTT CATGGATGCG
CTGCATGTCC GGCGCGCTGT ACTCGCCGGC TTCGACTGGG GTGCACGCAC CGCCGATATC
GTCGCGGCGC TGTGGCCCGA GCGGGTCAAA GCCCTGGTGT CAGTCAGTGG CTACCTGATC
AGCAGCCAGG AGGCCGCCAA AGCCCCGCTG CCACCCAGCG CCGAGCTGCA GTGGTGGTAC
CAGTACTACT TCGCGACCCC ACGCGGCCAG GCTGGCTATG AACAGAATCG GCATGCGTTC
GCCAAACTGA TCTGGCAAAC CGCCTCGCCC AGCTGGGCCT TCGACGATGC CACCTTCGAG
CGCAGCGCCA AGGCCCTGGA CAACCCCGAC CACGTGGCGA TTACCGTGCA CAACTATCGT
TGGCGGCTGG GGCTGGCCCT GGGCGAAACA CGCTATGACC CGCTGGAAGC CAAGCTGGCC
ACCTTCCCCA GCATCACGGT ACCGACCATT ACCTTGGAAG GCGACGCCAA CGGCGCCCCG
CACCCACCGG CCGAAGCGTA TGCGCAGCGC TTTACCGGCA AGTACGAATA TCGGCTGATA
AGCGGTGGCA TCGGCCACAA CCTGCCGCAG GAAGCACCAC AGGCGTTTGC CAAGGCGGTG
GTCGATGCGG ACCACATGTA G
 
Protein sequence
MPAHHSTTTP PRRSRHTLLA CALLPLGLMA VNLATAAPAQ PEAAVVADNF GPLKHINAGV 
LDVSYVEQGP ADGPVVILLH GWPYDIHSFE QVAPDLAAKG YRVLVPYVRG YGQTRFLSAQ
TPRNAQPTAL ASDVIAFMDA LHVRRAVLAG FDWGARTADI VAALWPERVK ALVSVSGYLI
SSQEAAKAPL PPSAELQWWY QYYFATPRGQ AGYEQNRHAF AKLIWQTASP SWAFDDATFE
RSAKALDNPD HVAITVHNYR WRLGLALGET RYDPLEAKLA TFPSITVPTI TLEGDANGAP
HPPAEAYAQR FTGKYEYRLI SGGIGHNLPQ EAPQAFAKAV VDADHM