Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3572 |
Symbol | |
ID | 5871363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3970896 |
End bp | 3971936 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641548693 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001669799 |
Protein GI | 167034568 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000126926 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.752327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCCC ATCACTCGAC CACCACCCCG CCACGCCGTT CCCGCCATAC CCTGCTTGCC TGCGCCCTGT TGCCGCTTGG GCTGATGGCC GTGAACCTCG CCACCGCTGC ACCCGCGCAG CCCGAGGCAG CAGTGGTGGC AGACAACTTC GGCCCGCTGA AACACATAAA CGCTGGCGTG CTCGACGTGT CCTACGTGGA GCAAGGTCCA GCCGATGGCC CGGTAGTGAT CCTGCTGCAT GGCTGGCCCT ATGACATTCA CAGCTTTGAG CAAGTTGCAC CTGACCTGGC GGCAAAAGGG TACCGAGTGT TGGTGCCCTA CGTGCGCGGC TACGGCCAGA CCCGCTTCCT GTCCGCGCAA ACGCCACGCA ATGCCCAGCC CACGGCGCTG GCCAGCGATG TCATTGCGTT CATGGATGCG CTGCATGTCC GGCGCGCTGT ACTCGCCGGC TTCGACTGGG GTGCACGCAC CGCCGATATC GTCGCGGCGC TGTGGCCCGA GCGGGTCAAA GCCCTGGTGT CAGTCAGTGG CTACCTGATC AGCAGCCAGG AGGCCGCCAA AGCCCCGCTG CCACCCAGCG CCGAGCTGCA GTGGTGGTAC CAGTACTACT TCGCGACCCC ACGCGGCCAG GCTGGCTATG AACAGAATCG GCATGCGTTC GCCAAACTGA TCTGGCAAAC CGCCTCGCCC AGCTGGGCCT TCGACGATGC CACCTTCGAG CGCAGCGCCA AGGCCCTGGA CAACCCCGAC CACGTGGCGA TTACCGTGCA CAACTATCGT TGGCGGCTGG GGCTGGCCCT GGGCGAAACA CGCTATGACC CGCTGGAAGC CAAGCTGGCC ACCTTCCCCA GCATCACGGT ACCGACCATT ACCTTGGAAG GCGACGCCAA CGGCGCCCCG CACCCACCGG CCGAAGCGTA TGCGCAGCGC TTTACCGGCA AGTACGAATA TCGGCTGATA AGCGGTGGCA TCGGCCACAA CCTGCCGCAG GAAGCACCAC AGGCGTTTGC CAAGGCGGTG GTCGATGCGG ACCACATGTA G
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Protein sequence | MPAHHSTTTP PRRSRHTLLA CALLPLGLMA VNLATAAPAQ PEAAVVADNF GPLKHINAGV LDVSYVEQGP ADGPVVILLH GWPYDIHSFE QVAPDLAAKG YRVLVPYVRG YGQTRFLSAQ TPRNAQPTAL ASDVIAFMDA LHVRRAVLAG FDWGARTADI VAALWPERVK ALVSVSGYLI SSQEAAKAPL PPSAELQWWY QYYFATPRGQ AGYEQNRHAF AKLIWQTASP SWAFDDATFE RSAKALDNPD HVAITVHNYR WRLGLALGET RYDPLEAKLA TFPSITVPTI TLEGDANGAP HPPAEAYAQR FTGKYEYRLI SGGIGHNLPQ EAPQAFAKAV VDADHM
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