Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3557 |
Symbol | |
ID | 5871348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3957816 |
End bp | 3958526 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641548678 |
Product | phosphoglycerate mutase |
Protein accession | YP_001669784 |
Protein GI | 167034553 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0406] Fructose-2,6-bisphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.370519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.395273 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCAACC TCTACCTGAT CCGACATGGC CAAGCCTCCT TCGGTGCCGA TGACTACGAC GTCCTCTCGC CCGTGGGCGT GCGCCAAAGC CAGGCCCTGG GTGAACACCT GGCCCAGTTG GGTATACGGC TGGATCGCTG CGTAGCAGGC GACCTGCGCC GCCAACAGGA TACCGCCCGC CTGGCGCTGC AGGCACTGCA CGCCAATGGT TGCCCAGTGC CGGCTGTTGA GACCGACGCC GCATTCAATG AGTTCGATGC CGACGGCGTG ATCCGTGCCC TATTGCCCGC ACTGTTGCCG GACGAGCCTA ATGCCTTGCA GGTACTGCGC AATGCCGCGC AGCACCGCAG CGAGTTCCAG CGCCTGTTCG CGCTGATGGT CCAGCGCTGG CACGATGGCG AACATGTCGA CGATGGCCTG GAAACCTGGC AGGCGTTCAC CGCCCGCGTT CAAGGTGGCC TGCAACGCGT ACTGGATGCC GCCGGCAGCG GCGACAATAT CGCCATCTTC ACCTCGGGCG GTACCATTGC CGCCCTGCTC CACCTGGTTA CCCGTATCAC CCCCAGTCAG GCGTTCACGC TGAACTGGCA GATCATCAAC ACGTCGCTCA GCCAGTTGAA GTTTCGCGGC CGCGACGTGG CACTGGCTTC CTTCAACAGC CAGGCCCATG TGCAGCTGTT GAAGGCGCCG GAGCTTGTCA CTTACCGATA A
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Protein sequence | MGNLYLIRHG QASFGADDYD VLSPVGVRQS QALGEHLAQL GIRLDRCVAG DLRRQQDTAR LALQALHANG CPVPAVETDA AFNEFDADGV IRALLPALLP DEPNALQVLR NAAQHRSEFQ RLFALMVQRW HDGEHVDDGL ETWQAFTARV QGGLQRVLDA AGSGDNIAIF TSGGTIAALL HLVTRITPSQ AFTLNWQIIN TSLSQLKFRG RDVALASFNS QAHVQLLKAP ELVTYR
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