Gene PputGB1_3557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3557 
Symbol 
ID5871348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3957816 
End bp3958526 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content64% 
IMG OID641548678 
Productphosphoglycerate mutase 
Protein accessionYP_001669784 
Protein GI167034553 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.370519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.395273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCAACC TCTACCTGAT CCGACATGGC CAAGCCTCCT TCGGTGCCGA TGACTACGAC 
GTCCTCTCGC CCGTGGGCGT GCGCCAAAGC CAGGCCCTGG GTGAACACCT GGCCCAGTTG
GGTATACGGC TGGATCGCTG CGTAGCAGGC GACCTGCGCC GCCAACAGGA TACCGCCCGC
CTGGCGCTGC AGGCACTGCA CGCCAATGGT TGCCCAGTGC CGGCTGTTGA GACCGACGCC
GCATTCAATG AGTTCGATGC CGACGGCGTG ATCCGTGCCC TATTGCCCGC ACTGTTGCCG
GACGAGCCTA ATGCCTTGCA GGTACTGCGC AATGCCGCGC AGCACCGCAG CGAGTTCCAG
CGCCTGTTCG CGCTGATGGT CCAGCGCTGG CACGATGGCG AACATGTCGA CGATGGCCTG
GAAACCTGGC AGGCGTTCAC CGCCCGCGTT CAAGGTGGCC TGCAACGCGT ACTGGATGCC
GCCGGCAGCG GCGACAATAT CGCCATCTTC ACCTCGGGCG GTACCATTGC CGCCCTGCTC
CACCTGGTTA CCCGTATCAC CCCCAGTCAG GCGTTCACGC TGAACTGGCA GATCATCAAC
ACGTCGCTCA GCCAGTTGAA GTTTCGCGGC CGCGACGTGG CACTGGCTTC CTTCAACAGC
CAGGCCCATG TGCAGCTGTT GAAGGCGCCG GAGCTTGTCA CTTACCGATA A
 
Protein sequence
MGNLYLIRHG QASFGADDYD VLSPVGVRQS QALGEHLAQL GIRLDRCVAG DLRRQQDTAR 
LALQALHANG CPVPAVETDA AFNEFDADGV IRALLPALLP DEPNALQVLR NAAQHRSEFQ
RLFALMVQRW HDGEHVDDGL ETWQAFTARV QGGLQRVLDA AGSGDNIAIF TSGGTIAALL
HLVTRITPSQ AFTLNWQIIN TSLSQLKFRG RDVALASFNS QAHVQLLKAP ELVTYR