Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3554 |
Symbol | |
ID | 5871344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3954309 |
End bp | 3955319 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641548674 |
Product | alcohol dehydrogenase |
Protein accession | YP_001669781 |
Protein GI | 167034550 |
COG category | [R] General function prediction only |
COG ID | [COG1064] Zn-dependent alcohol dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.33361 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCTG CTGTTGTTGC ACCAGGCCGG CGCGTGGACG TGGTAGAGAA AACCCTGCGC CCCCTCCAGC ACGGCGAAGC GCTGCTGAAG ATGCAATGCT GCGGTGTGTG CCACACCGAC CTGCACGTGA AAAATGGCGA CTTCGGTGAC AAGACCGGTG TAGTACTGGG CCACGAAGGC ATTGGCGTAG TCCAGGAAGT TGGCCCCGGC GTCACCTCGC TCAAGCCAGG CGACCGCGCC AGCGTTGCCT GGTTCTATCA AGGTTGCGGG CATTGCGAGT ACTGCAATAG CGGCAACGAA ACCCTGTGCC GCGAAGTGAA GAACTCCGGC TATACCGTGG ACGGCGGCAT GGCCGAGGCT TGCATCGTCC AAGCCGACTA TTCGGTCAAA GTACCCGACG GCCTCGACTC CGCTGCCGCC AGCAGCATTA CCTGCGCCGG CGTCACAACC TACAAGGCGG TGAAAATCTC CAACATCCGC CCCGGGCAAT GGATCGCCAT CTACGGCCTC GGCGGCCTGG GCAACCTGGC CCTGCAATAT GCCAAGAACG TATTCAACGC CAAAGTGATC GCCATCGACG TCAACGAAGA GCAACTGCGC TTCGCCAGCG AGATGGGCGC GGACCTGGTC GTCAACCCAC TCAACGAAGA CGCCGCGAAG GTTATCCAGG CCAAGACCGG TGGCGCCCAC GCTGCCGTGG TTACCGCCGT GGCCAAAGGC GCCTTCAACT CGGCCGTCGA TGCCTTGCGC GCTGGCGGGC GACTGGTTGC CGTCGGGCTG CCGTCGGAAT CCATGGACCT GAACATTCCC CGCCTGGTGC TGGATGGGAT CGAAGTGGTG GGCTCGCTGG TAGGTACACG CCAGGACCTG CAGGAGGCGT TCCAGTTTGC CGCTGAAGGC AAAGTGGTAC CCAAGGTGAC CCTGCGGCCG ATCGAAGATA TCAACCAGAT CTTTGACGAG ATGCTGGAGG GCAAGATCAA AGGCCGCATG GTGATCCAGT TCGAAGGCTG A
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Protein sequence | MKAAVVAPGR RVDVVEKTLR PLQHGEALLK MQCCGVCHTD LHVKNGDFGD KTGVVLGHEG IGVVQEVGPG VTSLKPGDRA SVAWFYQGCG HCEYCNSGNE TLCREVKNSG YTVDGGMAEA CIVQADYSVK VPDGLDSAAA SSITCAGVTT YKAVKISNIR PGQWIAIYGL GGLGNLALQY AKNVFNAKVI AIDVNEEQLR FASEMGADLV VNPLNEDAAK VIQAKTGGAH AAVVTAVAKG AFNSAVDALR AGGRLVAVGL PSESMDLNIP RLVLDGIEVV GSLVGTRQDL QEAFQFAAEG KVVPKVTLRP IEDINQIFDE MLEGKIKGRM VIQFEG
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