Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3544 |
Symbol | |
ID | 5871333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3946180 |
End bp | 3946860 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641548663 |
Product | molybdate ABC transporter, inner membrane subunit |
Protein accession | YP_001669771 |
Protein GI | 167034540 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4149] ABC-type molybdate transport system, permease component |
TIGRFAM ID | [TIGR02141] molybdate ABC transporter, permease protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0307421 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCACTGG ATGCCAGTGA CCTAGGTGCC ATCTGGCTGA CCGTGAAACT GGCCAGCCTG ACCACCCTGA TCCTGCTGGT TATCGGCACA CCCATCGCCT GGTGGCTGGC GCGCACGCGC TCATGGCTGC GCGGGCCGGT GGGGGCGGTG GTGGCATTGC CCCTGGTGCT GCCACCAACG GTGATCGGTT TCTACCTGCT GATCGCCCTC GGCCCACACG GCTGGCTCGG CCAGGCTACC CAGGCGCTGG GCCTGGGTAC TGTGGTGTTC AGCTTCACGG GCCTGGTGAT CGGCTCGACG GTGTATTCCA TGCCGTTCGT GGTGCAGCCG CTGCAAAATG CCTTTGGCGC GATCGGCCAG CGGCCGCTGG AAGTCGCCGC CACACTGCGC GCCAGCCCAT GGGACACCTT CGTTCATGTG GTACTGCCGC TGGCCCGCCC CGGCTTCGTC ACTGCCAGCA TCCTCGGCTT CGCCCATACC GTGGGCGAGT TTGGCGTGGT GCTGATGATC GGTGGCAACA TCCCCGACAA GACCCGCGTG GTCTCGGTGC AAATCTTCGA TCACGTCGAA GCCATGGAGT ATTCGCAAGC CCACTGGCTG GCCGGTGCCA TGCTGGTGTT CTCTTTCCTG GTGCTGCTCC TGCTGTACGC CGGACGCCGC GGCAAAGCTG GCTGGAGCTG A
|
Protein sequence | MPLDASDLGA IWLTVKLASL TTLILLVIGT PIAWWLARTR SWLRGPVGAV VALPLVLPPT VIGFYLLIAL GPHGWLGQAT QALGLGTVVF SFTGLVIGST VYSMPFVVQP LQNAFGAIGQ RPLEVAATLR ASPWDTFVHV VLPLARPGFV TASILGFAHT VGEFGVVLMI GGNIPDKTRV VSVQIFDHVE AMEYSQAHWL AGAMLVFSFL VLLLLYAGRR GKAGWS
|
| |