Gene PputGB1_3544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3544 
Symbol 
ID5871333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3946180 
End bp3946860 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content65% 
IMG OID641548663 
Productmolybdate ABC transporter, inner membrane subunit 
Protein accessionYP_001669771 
Protein GI167034540 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4149] ABC-type molybdate transport system, permease component 
TIGRFAM ID[TIGR02141] molybdate ABC transporter, permease protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0307421 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTGG ATGCCAGTGA CCTAGGTGCC ATCTGGCTGA CCGTGAAACT GGCCAGCCTG 
ACCACCCTGA TCCTGCTGGT TATCGGCACA CCCATCGCCT GGTGGCTGGC GCGCACGCGC
TCATGGCTGC GCGGGCCGGT GGGGGCGGTG GTGGCATTGC CCCTGGTGCT GCCACCAACG
GTGATCGGTT TCTACCTGCT GATCGCCCTC GGCCCACACG GCTGGCTCGG CCAGGCTACC
CAGGCGCTGG GCCTGGGTAC TGTGGTGTTC AGCTTCACGG GCCTGGTGAT CGGCTCGACG
GTGTATTCCA TGCCGTTCGT GGTGCAGCCG CTGCAAAATG CCTTTGGCGC GATCGGCCAG
CGGCCGCTGG AAGTCGCCGC CACACTGCGC GCCAGCCCAT GGGACACCTT CGTTCATGTG
GTACTGCCGC TGGCCCGCCC CGGCTTCGTC ACTGCCAGCA TCCTCGGCTT CGCCCATACC
GTGGGCGAGT TTGGCGTGGT GCTGATGATC GGTGGCAACA TCCCCGACAA GACCCGCGTG
GTCTCGGTGC AAATCTTCGA TCACGTCGAA GCCATGGAGT ATTCGCAAGC CCACTGGCTG
GCCGGTGCCA TGCTGGTGTT CTCTTTCCTG GTGCTGCTCC TGCTGTACGC CGGACGCCGC
GGCAAAGCTG GCTGGAGCTG A
 
Protein sequence
MPLDASDLGA IWLTVKLASL TTLILLVIGT PIAWWLARTR SWLRGPVGAV VALPLVLPPT 
VIGFYLLIAL GPHGWLGQAT QALGLGTVVF SFTGLVIGST VYSMPFVVQP LQNAFGAIGQ
RPLEVAATLR ASPWDTFVHV VLPLARPGFV TASILGFAHT VGEFGVVLMI GGNIPDKTRV
VSVQIFDHVE AMEYSQAHWL AGAMLVFSFL VLLLLYAGRR GKAGWS