| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3542 |
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| Symbol | |
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| ID | 5871331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3944254 |
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| End bp | 3945339 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641548661 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_001669769 |
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| Protein GI | 167034538 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0130805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCACT GGCCCGACCG CCGTATCCTC GACCTGCTGG GCGTCGAGTT GCCCATTCTG
CAGGCGCCCA TGGCGGGGGC GACCGGCTCA CCCATGGCCA TTGCCGTGGG CCTGGCAGGT
GGGCTGGGCG CCCTGCCCTG CGCCATGCTC AGCGGCGAGC AAGTGCGCGC CGAAATCGCC
GCGTTCCGCG CTGGCTGCCC GGGGCGCCCA CTTAACCTGA ACTTCTTTTG CCACCAGCCG
CCAGCGCCCG ATGCCGAGCA CGATGCGCGT TGGAAGCAGG CCCTTGAACC TTATTACAAC
GAAGTGGGTG CCGATTTCGC GGCGCCCACG CCGGTGTCCA ACCGTGCGCC TTTCGACGAG
CAAAGCTGCC AGCTGGTCGA AGCCTTGCGC CCGGAGGTGG TGAGCTTCCA CTTCGGCCTA
CCCCAGGCCG AACTGCTGCA GCGGGTAAAA GCCAGCGGTG CCAAGGTGCT CTCCAGTGCC
ACTACGGTGG AGGAGGCCAT CTGGCTGGAA CACAACGGTT GCGACGCGAT CATTGCCATG
GGGTATGAAG CCGGTGGCCA TCGCGGCATG TTCCTGAGTG ACGACATCAC CAGCCAGATC
GGTACGTTCG CCCTGGTACC CCAGATTGCC GATGCGGTCG GCGTCCCGGT GATTGCCGCG
GGTGGCATCG GCGACCACCG TGGGCTGGTG GCGGCGCTGG CCCTGGGTGC CTCGGCAGTG
CAGATCGGCA CGGCTTACCT GTTTTGCCCC GAGGCCAAGG TTTCGCCAGC GCATCGCCGG
GCGCTGGACA GCGCGTCTGC CAGCGACACG GCGCTGACCA ACCTGTTCAC CGGCCGCCCC
GCGCGGGGTA TCAACAACCG CATCATGCGC GAGCTGGGGC CGATGAGCGC GCTGGCGCCA
CGCTTCCCGC TGGCGGGTGG GGCATTGATG CCTTTGCGGG CGATCACCGA TCCGCTGGGC
AATAGTGACT TCAGCAATCT GTGGTCGGGG CAGGCGTTGC GGCTGGGACG GCACATGCCG
GCAGGTGAGC TGACCCAGGA AATTGCCGAA AAGGCACTGG CCGTGGTTGG GCACCAGGCT
TTTTGA
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| Protein sequence | MSHWPDRRIL DLLGVELPIL QAPMAGATGS PMAIAVGLAG GLGALPCAML SGEQVRAEIA
AFRAGCPGRP LNLNFFCHQP PAPDAEHDAR WKQALEPYYN EVGADFAAPT PVSNRAPFDE
QSCQLVEALR PEVVSFHFGL PQAELLQRVK ASGAKVLSSA TTVEEAIWLE HNGCDAIIAM
GYEAGGHRGM FLSDDITSQI GTFALVPQIA DAVGVPVIAA GGIGDHRGLV AALALGASAV
QIGTAYLFCP EAKVSPAHRR ALDSASASDT ALTNLFTGRP ARGINNRIMR ELGPMSALAP
RFPLAGGALM PLRAITDPLG NSDFSNLWSG QALRLGRHMP AGELTQEIAE KALAVVGHQA
F
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