Gene PputGB1_3540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3540 
Symbol 
ID5871329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3943722 
End bp3944024 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content56% 
IMG OID641548659 
Producthypothetical protein 
Protein accessionYP_001669767 
Protein GI167034536 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00970337 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAATTCG TACACCAGCG CGAGCACCTC AACGAGGACG ACATCGTCGT CATCGAGTGC 
TCTCAGCGCT GCAATATCCG CCTGATGAAC GACGCCAACT TCCGCAGCTT CAAGAACGGC
GGCCGTCATA CTTACCACGG CGGCCATTTC GAGAAGTTTC CGGCGAAGAT CACCGTGCCC
AGCACCGGCT TCTGGAACAT CACCATCGAT ACCGTGACCA CACGCCCGAT CTCGGTCACT
CGCAAGCCAA CCCTGACCCA CAAGATCAAG ATCATCCGTC GTTCGTCGTC GAAACTCAGA
TAA
 
Protein sequence
MKFVHQREHL NEDDIVVIEC SQRCNIRLMN DANFRSFKNG GRHTYHGGHF EKFPAKITVP 
STGFWNITID TVTTRPISVT RKPTLTHKIK IIRRSSSKLR