Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3525 |
Symbol | |
ID | 5871314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3930985 |
End bp | 3931719 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641548644 |
Product | hypothetical protein |
Protein accession | YP_001669752 |
Protein GI | 167034521 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.675078 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.214556 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGTG GCCAGAGCCG GGCGCTGCCT GCCTGGCGTT GGAAAAAGCG AGTGTCCATG GAGCAACATT CCGTCAAAAC CGCCTACCGA CGGCTGCTGG CCGCCTGTCT GATGGCTGCC ACCCTGGCCG GTTGTGCCAG CGCACCGCCT GCCAACCTCA AGGGCTTGCC TCAGCGAGTG GAGATCAGCA GCGTGCCGTT CTACCGTGGC AACGCCAACC ACAGCGGGGC TATGGCACTG GCGGCCGTGC TGTCGCAACA GGGGGCTCCG ATCACACCGG GGCTTCTGGA CAAACCGTTG AACCTGCCCC AGGGCGCCGA AGCGCTGGAT ACCGGTATCC CCCGCGTGGC GCGGGACTAC GGCATGGTGG TGTACCCGCT GGACAAACAA CTGGACGCGC TGTTGACCCA AGTGGCGGCG GGCAACCCAG TGCTGCTGCG TTACGAGGAA GGTTCGGCCT GGTGGGGTGA GCCGCGTTAT GCGGTGCTGA TCGGTTATGA CCGTTACAAG CAACGGGTGT TGTTGCGCTC GGGCATGCAC CGGCGGCAGG TGATGGCATT CGATGAGTTT GCCTCGGCGT GGGCGAAGCA GGGGAGCTGG GCGGTGCTGG TGCAGCCACC GCGACAATTG CCGGCCCAGG TGGATCGCCA GCGCTGGTTG ATGGCTGCCG ATGAGCTGGT CAAGGCGGGG CAGGAAGTTG CAGCGAAACA GGCGGTGAAT AGCCTGAACA AATGA
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Protein sequence | MIGGQSRALP AWRWKKRVSM EQHSVKTAYR RLLAACLMAA TLAGCASAPP ANLKGLPQRV EISSVPFYRG NANHSGAMAL AAVLSQQGAP ITPGLLDKPL NLPQGAEALD TGIPRVARDY GMVVYPLDKQ LDALLTQVAA GNPVLLRYEE GSAWWGEPRY AVLIGYDRYK QRVLLRSGMH RRQVMAFDEF ASAWAKQGSW AVLVQPPRQL PAQVDRQRWL MAADELVKAG QEVAAKQAVN SLNK
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