Gene PputGB1_3521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3521 
Symbol 
ID5871308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3927142 
End bp3927834 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content63% 
IMG OID641548638 
Productdeoxyribonuclease I 
Protein accessionYP_001669748 
Protein GI167034517 
COG category[L] Replication, recombination and repair 
COG ID[COG2356] Endonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.643247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.271071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTTT CGCTTTTCGC TGCAACCTGC CTGCTGCTGA CCGCCCCCTT TGTTCAAGCC 
GACGCCCCGC GTACCTTCCA GGAGGCCAAG AAGGTCGCCT GGAAGCTGTA TGCGCCGCAA
TCGACCGAGT TTTATTGCGG CTGCAAATAC AAGGGCAACA AGGTCGACCT GGCGTCCTGT
GGCTATGCCC CGCGCAAGAA TGCCCAGCGC GCCTCGCGCA TCGAATGGGA GCACATCGTA
CCGGCATGGC AGATCGGCCA TCAGCGCCAG TGCTGGCAGG CCGGCGGGCG CAAGCAGTGC
GCGCAGCATG ACGACGTGTA CAAGCGCGCC GAAGCTGACC TGCACAACCT GGTGCCCAGC
ATCGGCGAGG TCAACGGCGA CCGCAGCAAT TTCAGTTTCG GCTGGCTGCC CGAACAACGC
GGCCAGTACG GCCGTTGCCT GACCCAGGTC GACTTCAAGG CCAAGAAGGT GATGCCGCGC
CCTTCGATCC GCGGCATGAT CGCGCGCACC TACTTCTACA TGAGCCAGCA GTACAACCTG
CGGTTGTCCA GCCAGGACCG CCAGCTGTTC GAGGCCTGGA ACAAGACCTA CCCGCCGCAA
GCCTGGGAGC AGCAACGCAA CCAGCGAGTG GCCTGCGTGA TGGGGCGGGG CAACGCGTTT
GTCGGGCCGG TCAACCTCAA GGCCTGTGGC TGA
 
Protein sequence
MRVSLFAATC LLLTAPFVQA DAPRTFQEAK KVAWKLYAPQ STEFYCGCKY KGNKVDLASC 
GYAPRKNAQR ASRIEWEHIV PAWQIGHQRQ CWQAGGRKQC AQHDDVYKRA EADLHNLVPS
IGEVNGDRSN FSFGWLPEQR GQYGRCLTQV DFKAKKVMPR PSIRGMIART YFYMSQQYNL
RLSSQDRQLF EAWNKTYPPQ AWEQQRNQRV ACVMGRGNAF VGPVNLKACG