Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3521 |
Symbol | |
ID | 5871308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3927142 |
End bp | 3927834 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641548638 |
Product | deoxyribonuclease I |
Protein accession | YP_001669748 |
Protein GI | 167034517 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2356] Endonuclease I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.643247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.271071 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAGTTT CGCTTTTCGC TGCAACCTGC CTGCTGCTGA CCGCCCCCTT TGTTCAAGCC GACGCCCCGC GTACCTTCCA GGAGGCCAAG AAGGTCGCCT GGAAGCTGTA TGCGCCGCAA TCGACCGAGT TTTATTGCGG CTGCAAATAC AAGGGCAACA AGGTCGACCT GGCGTCCTGT GGCTATGCCC CGCGCAAGAA TGCCCAGCGC GCCTCGCGCA TCGAATGGGA GCACATCGTA CCGGCATGGC AGATCGGCCA TCAGCGCCAG TGCTGGCAGG CCGGCGGGCG CAAGCAGTGC GCGCAGCATG ACGACGTGTA CAAGCGCGCC GAAGCTGACC TGCACAACCT GGTGCCCAGC ATCGGCGAGG TCAACGGCGA CCGCAGCAAT TTCAGTTTCG GCTGGCTGCC CGAACAACGC GGCCAGTACG GCCGTTGCCT GACCCAGGTC GACTTCAAGG CCAAGAAGGT GATGCCGCGC CCTTCGATCC GCGGCATGAT CGCGCGCACC TACTTCTACA TGAGCCAGCA GTACAACCTG CGGTTGTCCA GCCAGGACCG CCAGCTGTTC GAGGCCTGGA ACAAGACCTA CCCGCCGCAA GCCTGGGAGC AGCAACGCAA CCAGCGAGTG GCCTGCGTGA TGGGGCGGGG CAACGCGTTT GTCGGGCCGG TCAACCTCAA GGCCTGTGGC TGA
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Protein sequence | MRVSLFAATC LLLTAPFVQA DAPRTFQEAK KVAWKLYAPQ STEFYCGCKY KGNKVDLASC GYAPRKNAQR ASRIEWEHIV PAWQIGHQRQ CWQAGGRKQC AQHDDVYKRA EADLHNLVPS IGEVNGDRSN FSFGWLPEQR GQYGRCLTQV DFKAKKVMPR PSIRGMIART YFYMSQQYNL RLSSQDRQLF EAWNKTYPPQ AWEQQRNQRV ACVMGRGNAF VGPVNLKACG
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