| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3518 |
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| Symbol | |
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| ID | 5871305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3923185 |
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| End bp | 3924480 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641548635 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001669745 |
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| Protein GI | 167034514 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00768036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.224647 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCCCA CGATCGCCCC CGTGCAAACC AGCACCCGCC ACCCCGCCGC CACGACTGTG
GTAATCATCG GTGGCGGCAT CATCGGCCTG ACTGCCGCAC TGACGCTCGC CGAGCGCAAC
ATACCGGTGG TGGTGCTGGA AAAGGGGCGC ATCGCTGGCG AGCAGTCGTC GCGCAACCTG
GGCTGGGTGC GCAAGACCAA CCGTCACGCC CACGACATCC CCCTGGCACT GGCGGCCGAC
CGGCTGTGGG CCGAGATGCC AGCGCGCGTA GGCAGCGACG TTGGCTATCG CCAGGCGGGC
ATCATGTTCA TCGGCCGCAA CGACACGCAG ATGGGCATGC ATGAAGGCTG GCTTAAAAGT
GTCGAGGCGC TGGGCCTTGA TTCGCGCCTG CTGAGCGCGC GTGAAATCGC CCAGAAAGTG
CCGGGTGGTC GGGCGGATTG GGCAGGCGGC ATCTTCACAC CCTCCGATGC CCGCGCAGAA
CCGACGCTGG CCGCCAGCGC CATCGCCGGT GCGGCCATTG CCAAAGGCGC GGTGGTGGTG
GAGAACTGCG CGGTGCGTAC GCTGGTCACC GCAACCGGCC GTATCAGCGG GGTGGTCACC
GAGCAAGGCG AAATCCGCTG CGACCAGGTA TTGCTGGCCG GTGGCCTATG GTCGCGCAAG
TTCCTCGGCA ACCTGGGCAT CAACCTGCCG ACCTTGCCGC TGACCTGTTC CGTGCTGCGC
ACCGAGCCAA TGGACGGGCC TACCGATATC GCCGTCGGCG CACCGGACTT TTCGTTTCGC
AAGCACAAGG ACGGCGGTTA CATCATCACC CAGCGCGGCG CACTGGATGC TTTCCTCACC
CTCGACCACC TGCTGCTGGG CAAGCGTTAC CTGCCCCAGC TGCGTGCGCA GCGGGACTTT
TTGCGCATCA GCTTTGGCAA ATACTTCTTC AAGGACCTGG CCCTGGCCCG GCGTTGGAAA
GCCACGGATG TGACCCCTTT CGAGCGCGTA AGGGTACAAG ACCCACACGC CAACCCAGCA
CTCAACGACG AGGCCATGCG CAACCTCAAA GCGGCCTGGC CGGTATTCGA ACAGGCACGC
ATCGCCAGCG CCTGGGCTGG CACGATTGAC GTCACCCCCG ACTCCAACCC GGTAATCGGC
CCGGTGGCCA GCATCCCAGG CCTGACCCTG GCCACCGGTT TTTCCGGGCA TGGCTTCGGC
ACCTCGCCCG CTGCCGGCCA GTTGGCGGCG GACCTGGTAT CCCAGGCTGC ACCCCTGATT
GACCCAAGCC CTTACCGCTT CGAGCGCTTC GCCTGA
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| Protein sequence | MSPTIAPVQT STRHPAATTV VIIGGGIIGL TAALTLAERN IPVVVLEKGR IAGEQSSRNL
GWVRKTNRHA HDIPLALAAD RLWAEMPARV GSDVGYRQAG IMFIGRNDTQ MGMHEGWLKS
VEALGLDSRL LSAREIAQKV PGGRADWAGG IFTPSDARAE PTLAASAIAG AAIAKGAVVV
ENCAVRTLVT ATGRISGVVT EQGEIRCDQV LLAGGLWSRK FLGNLGINLP TLPLTCSVLR
TEPMDGPTDI AVGAPDFSFR KHKDGGYIIT QRGALDAFLT LDHLLLGKRY LPQLRAQRDF
LRISFGKYFF KDLALARRWK ATDVTPFERV RVQDPHANPA LNDEAMRNLK AAWPVFEQAR
IASAWAGTID VTPDSNPVIG PVASIPGLTL ATGFSGHGFG TSPAAGQLAA DLVSQAAPLI
DPSPYRFERF A
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