| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3503 |
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| Symbol | |
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| ID | 5871290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3907329 |
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| End bp | 3908132 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548620 |
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| Product | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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| Protein accession | YP_001669730 |
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| Protein GI | 167034499 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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| TIGRFAM ID | [TIGR02311] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.037052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATGC CCATCAACCA CTTCAAGCAA CGCCTGTGCA GCGGCGAGCC GCAGGTCGGC
CTGTGGCTCG GCCTGGCCGA TGCCTACTGC GCAGAGCTGG CCGCCAATGC CGGTTTCGAC
TGGCTGCTGA TCGACGGCGA ACACGCCCCC AACGACCTGC GCGGCATGCT CGCGCAGTTG
CAGGCGGTGG CCCCCTACCC CAGCCAGGCG GTAATCCGCC CGGTAATCGG TGATACCGCG
CTGATCAAGC AGGTGCTGGA CATCGGCGCT CAGACCTTGC TGGTGCCGAT GGTGGAAAGC
GCTGAACAGG CGCAGCAACT GGTCAAGGCC ATGCATTACC CGCCCAACGG CATTCGTGGC
GTGGGCAGCG CACTGGCACG GGCATCGCGC TGGAACACCA TCCCCGGCTA CCTGGACCAC
GCCGATGAAC AGATGTGCCT GCTGGTGCAG ATCGAAAACA AGGAAGGCCT GGCCAACCTG
GACGAGATCG TTGCGGTGGA AGGTGTGGAT GGCGTGTTCA TCGGGCCTGC GGACTTGAGC
GCAGCCATGG GCCATCGGGG CAACCCTGGG CATCCAGAGG TGCAGGCAGC GATCGAGGAT
GCCATCGTAC GCATCGGCAA GGCGGGCAAG GCTGCAGGTA TTCTCAGCGC GGATGAGAAA
CTGGCGCGAC GTTATATCGA GCTGGGTGCG GCATTTGTGG CCGTCGGTGT GGATACCACG
GTGCTGATGC GCGGGCTGCG CGAGCTGGCA GGGAAGTTCA AAGATACGCC GATGGTTGGC
AGTGCCGGGG GGAGTGTCTA CTGA
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| Protein sequence | MDMPINHFKQ RLCSGEPQVG LWLGLADAYC AELAANAGFD WLLIDGEHAP NDLRGMLAQL
QAVAPYPSQA VIRPVIGDTA LIKQVLDIGA QTLLVPMVES AEQAQQLVKA MHYPPNGIRG
VGSALARASR WNTIPGYLDH ADEQMCLLVQ IENKEGLANL DEIVAVEGVD GVFIGPADLS
AAMGHRGNPG HPEVQAAIED AIVRIGKAGK AAGILSADEK LARRYIELGA AFVAVGVDTT
VLMRGLRELA GKFKDTPMVG SAGGSVY
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