| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3498 |
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| Symbol | |
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| ID | 5871285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3902198 |
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| End bp | 3903667 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548615 |
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| Product | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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| Protein accession | YP_001669725 |
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| Protein GI | 167034494 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR02299] 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCA TGATCAAGCA CTGGATCAAC GGCCGTGAGG TCGAGAGCAA AGACACCTTC
GTCAACTACA ACCCGGCCAC CGGCGATGCC ATTTGTGAAG TCGCCAGCGG TGGCGCCGAA
GAAGTGGCGC AAGCCGTGGC CGCGGCCAAG GAAGCCTTCC CCAAGTGGGC CAACACCCCG
GCCAAGGAAC GTGCCCGGCT GATGCGCAAG CTCGGTGAGC TGATCGACCA GAACGTGCCG
AAACTGGCCG AGCTGGAAAC CCTCGACACC GGCCTGCCGA TCCACCAGAC CAAGAACGTG
CTGATCCCGC GTGCCTCGCA CAACTTCGAT TTTTTCGCCG AAGTGTGCAC ACGCATGGAT
GGCCACACCT ACCCGGTCGA CGACCAGATG CTCAACTACA CCCTGTACCA GCCGGTGGGT
GTGTGCGGCC TGGTCAGCCC GTGGAACGTG CCGTTCATGA CCGCCACCTG GAAGACCGCG
CCGTGCCTGG CGCTGGGCAA CACCGCCGTG CTGAAGATGA GCGAACTGTC GCCACTGACC
GCCAACGAAC TGGGCCGCCT GGCTGTCGAA GCCGGCATCC CCAACGGCGT GCTCAACGTG
ATCCAGGGCT ATGGCGCCAC CGCTGGCGAC GCCCTGGTAC GTCACCCGGA TGTACGCGCT
ATTTCCTTCA CCGGCGGCAC CGCCACCGGC AAGAAGATCA TGCAGACCGC TGGCCTGAAA
AAGTACTCGA TGGAACTGGG CGGAAAATCG CCGGTGCTGA TCTTCGAAGA TGCCGACCTT
GAGCGTGCGC TGGACGCCGC GCTGTTCACC ATCTTCTCGC TGAACGGCGA ACGCTGCACC
GCCGGCAGCC GCATTTTCAT CCAGGAAAGC GTGTACCCGC AGTTCGTCGC CGAGTTCGCG
GCGCGCGCCA AGCGCCTGAT CGTCGGTGAC CCGACCGACC CGAAAACCCA GGTCGGTTCG
ATGATCACCC AGCAGCACTA CGACAAGGTC ACCGGCTACA TCCGCATCGG CATGGAAGAA
GGCGCACGCC TGGTCGCCGG TGGCCTGGAA CGCCCGGCCA ACCTGCCGGC GCATTTGGCC
AAAGGGCAGT TCATCCAGCC CACCGTGTTC GCCGATGTGA ACAACAAGAT GCGCATTGCC
CAGGAAGAAA TCTTCGGCCC GGTGGTGTGC CTGATCCCGT TCAAGGACGA AGCAGAAGCG
CTGCAGCTGG CCAACGACAC CGAGTACGGC CTGGCGTCGT ACATCTGGAC CCAGGACATC
GGCAAGGCCC ACCGCCTGGC CCGTGGCATC GAGGCCGGCA TGGTGTTCAT CAACAGCCAG
AACGTACGCG ACCTGCGCCA GCCATTCGGT GGCGTGAAAG GTTCCGGTAC CGGGCGTGAA
GGCGGGCAGT ACAGCTTCGA GGTCTTTGCA GAGATCAAGA ACGTGTGTAT TTCCATGGGT
AGCCACCACA TTCCGCGCTG GGGCGTGTGA
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| Protein sequence | MSSMIKHWIN GREVESKDTF VNYNPATGDA ICEVASGGAE EVAQAVAAAK EAFPKWANTP
AKERARLMRK LGELIDQNVP KLAELETLDT GLPIHQTKNV LIPRASHNFD FFAEVCTRMD
GHTYPVDDQM LNYTLYQPVG VCGLVSPWNV PFMTATWKTA PCLALGNTAV LKMSELSPLT
ANELGRLAVE AGIPNGVLNV IQGYGATAGD ALVRHPDVRA ISFTGGTATG KKIMQTAGLK
KYSMELGGKS PVLIFEDADL ERALDAALFT IFSLNGERCT AGSRIFIQES VYPQFVAEFA
ARAKRLIVGD PTDPKTQVGS MITQQHYDKV TGYIRIGMEE GARLVAGGLE RPANLPAHLA
KGQFIQPTVF ADVNNKMRIA QEEIFGPVVC LIPFKDEAEA LQLANDTEYG LASYIWTQDI
GKAHRLARGI EAGMVFINSQ NVRDLRQPFG GVKGSGTGRE GGQYSFEVFA EIKNVCISMG
SHHIPRWGV
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