| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3490 |
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| Symbol | |
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| ID | 5871277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3894009 |
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| End bp | 3895004 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548607 |
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| Product | monosaccharide-transporting ATPase |
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| Protein accession | YP_001669717 |
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| Protein GI | 167034486 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.172066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.267004 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA CCCCGCTAGA CAGCCAAGGC GCCGCTCCCG TGCGCCGCAG TGGCACGTAC
TTTGGCTTGG CCACTTACTT GGGCTTGGCT GGCGCTTTGC TGGCGATGAT CGTGTTGTTC
TCATTCCTCA GCAGCCACTT TTGGTCTTAC AGCACCTTCA GCACCTTGGC CAACCAGATC
CCGGACCTGA TGGTACTGGC GGTGGGCATG ACCTTCGTGC TGATTATCGG CGGTATCGAC
CTGTCGGTGG GCTCGGTGCT GGCGCTGGCT GCCTCCGCGG TGAGCGTGGC GATTCTCGGC
TGGGGCTGGG GCGTGCTGCC CTCGGCGATG CTGGGCATGG CCGTGGCCGC GCTGGCCGGC
AGCATTACCG GGTGCGTAAC CGTGGCCTGG CGCATCCCGT CATTCATTGT TTCGCTCGGC
GTGCTGGAAA TGGCCCGTGG TCTGGCCTAC CAGTTCACCG ACTCGCGCAC CGCCTATATT
GGCGATGCCT ATGCCTGGTT CTCCAACCCG GTCGCCTTTG GTATTTCGCC AGCCTTCATC
ATTGCCTTGC TGGTAATCGT GTTGGCCCAG CTGGTGCTGA CCCGTACGGT ATTCGGCCGC
TACCTGATTG GCATTGGCAC CAACGAAGAA GCCGTACGCC TCGCCGGTAT CGACCCGCGC
CCCTACAAAG TGTTGGTGTT CGCCTTGATG GGCCTGCTCG CCGGCCTGGC CGCGCTGTTC
CAGATCTCGC GGCTGGAAGC CGCCGACCCC AATGCTGGCT CCGGCCTGGA ACTGCAGGTG
ATTGCCGCTG TAGTGATCGG CGGCACCAGC CTGATGGGCG GGCGTGGCTC GGTTATCAGC
ACCTTCTTTG GCGTACTGAT CATTTCCGTA CTGGCCGCCG GGCTGGCGCA GATCGGCGCC
AGCGAACCAA CCAAACGCAT CATCACCGGG GCGGTGATCG TCATCGCCGT GGTGCTCGAC
ACTTACCGTA GCCGGCGTGC AGCCCGGCGG AACTGA
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| Protein sequence | MKTTPLDSQG AAPVRRSGTY FGLATYLGLA GALLAMIVLF SFLSSHFWSY STFSTLANQI
PDLMVLAVGM TFVLIIGGID LSVGSVLALA ASAVSVAILG WGWGVLPSAM LGMAVAALAG
SITGCVTVAW RIPSFIVSLG VLEMARGLAY QFTDSRTAYI GDAYAWFSNP VAFGISPAFI
IALLVIVLAQ LVLTRTVFGR YLIGIGTNEE AVRLAGIDPR PYKVLVFALM GLLAGLAALF
QISRLEAADP NAGSGLELQV IAAVVIGGTS LMGGRGSVIS TFFGVLIISV LAAGLAQIGA
SEPTKRIITG AVIVIAVVLD TYRSRRAARR N
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