Gene PputGB1_3474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3474 
Symbol 
ID5871261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3881386 
End bp3881742 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content55% 
IMG OID641548591 
ProductMerR family transcriptional regulator 
Protein accessionYP_001669701 
Protein GI167034470 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00283655 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGGAAC CAAGCCATAA CGACGAACTG CCCCCCATAC CGGGCAAACG CTACTTCACC 
ATTGGTGAAG TGAGTGAGCT TTGTGCGGTT AAGCCGCACG TGCTGCGGTA TTGGGAGCAG
GAGTTCGACC AGCTTAACCC TGTGAAGCGG CGGGGCAACC GGCGGTATTA CCAGCGCCAG
GATGTGCTGA TGATCCGCCA GATTCGTGCG CTGCTTTATG ACCAGGGGTT CACCATTGGC
GGGGCCCGGT TGAGGCTCTC CAGTGATGAG GCTAAGGATG AATCCAGCCA ATACAAGCAA
CTGATTCGGC AGATGATTGT TGAGTTGGAG GATGTGTTGG TAGTGTTGAA GAAATGA
 
Protein sequence
MLEPSHNDEL PPIPGKRYFT IGEVSELCAV KPHVLRYWEQ EFDQLNPVKR RGNRRYYQRQ 
DVLMIRQIRA LLYDQGFTIG GARLRLSSDE AKDESSQYKQ LIRQMIVELE DVLVVLKK