Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3474 |
Symbol | |
ID | 5871261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3881386 |
End bp | 3881742 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641548591 |
Product | MerR family transcriptional regulator |
Protein accession | YP_001669701 |
Protein GI | 167034470 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00283655 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGGAAC CAAGCCATAA CGACGAACTG CCCCCCATAC CGGGCAAACG CTACTTCACC ATTGGTGAAG TGAGTGAGCT TTGTGCGGTT AAGCCGCACG TGCTGCGGTA TTGGGAGCAG GAGTTCGACC AGCTTAACCC TGTGAAGCGG CGGGGCAACC GGCGGTATTA CCAGCGCCAG GATGTGCTGA TGATCCGCCA GATTCGTGCG CTGCTTTATG ACCAGGGGTT CACCATTGGC GGGGCCCGGT TGAGGCTCTC CAGTGATGAG GCTAAGGATG AATCCAGCCA ATACAAGCAA CTGATTCGGC AGATGATTGT TGAGTTGGAG GATGTGTTGG TAGTGTTGAA GAAATGA
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Protein sequence | MLEPSHNDEL PPIPGKRYFT IGEVSELCAV KPHVLRYWEQ EFDQLNPVKR RGNRRYYQRQ DVLMIRQIRA LLYDQGFTIG GARLRLSSDE AKDESSQYKQ LIRQMIVELE DVLVVLKK
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