Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3445 |
Symbol | |
ID | 5871231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3863030 |
End bp | 3863827 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641548561 |
Product | hypothetical protein |
Protein accession | YP_001669672 |
Protein GI | 167034441 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00550577 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 1.17041e-16 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCCGCCTC ATGTTCGCCA GCTATCATTT ATCTTGCCAC TGGCTGTGCT AGTTGGCTGC TCTTCAGGGG CTGGAACCGG ACCTGCCCAG CAGGTCGCTT ACTCGCCATT CGCGGACTCC AGGGGGCTGA CATTCAATAA AATCGCCACC CCAAGCGATC TGGCAAAGAT GGTTGACGAT ATCGGCGGGG CTCAGCAAAA GTTTGAGACC GACGTAGACT TCAACCTTCG AATGAAGAAG CTAAAGCCTT TTGAGGTGTG CAAGAGCGTC AGTGAATCTA GCGTAAAGTT CGACTCTTCG ACAGGTAGCG CCATCCACAA GGAATGGCTC TATGACGCCC AGATTTCAGG CTATCGAGAG AAAAATGGCG AGACATTCAG TGACCCTGCC GTTTTCATGC CTGGCCTGGA TGCTTCATTT GGGTCAAAGA AAATTGGCGA GTACGCGGGG CAGAATTCTT TTGGAGCAAC AGCAGTCGTT GAGATCCGCA AGGCAGACAC TGTTCACCTG GTGCTTGATC CCATCTTTAA GAGCCCCCTC ACCTTTCCGC ACCCCTACAT AGAGGCAGAT GCGAGAAGCC TAGTGGCAGC GCGCCAGAAG GCTTTCTTGT GTGTGACCGC TATTCCGACG GCTCCATTCT ATCGCCAGAG CGTGTTCCAC TCATCCCCTA CGTTGGCACA CCCTTATGAG GGAGAGGTCA CGCACCACTT TTTCAGGGTG AAGATTGGCG GCATCAGGCT CACTGATGAT AAAGGCAACA CCATTCCTGG GCAGGTATCC GTCAGCCCAG GGGTTTAA
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Protein sequence | MPPHVRQLSF ILPLAVLVGC SSGAGTGPAQ QVAYSPFADS RGLTFNKIAT PSDLAKMVDD IGGAQQKFET DVDFNLRMKK LKPFEVCKSV SESSVKFDSS TGSAIHKEWL YDAQISGYRE KNGETFSDPA VFMPGLDASF GSKKIGEYAG QNSFGATAVV EIRKADTVHL VLDPIFKSPL TFPHPYIEAD ARSLVAARQK AFLCVTAIPT APFYRQSVFH SSPTLAHPYE GEVTHHFFRV KIGGIRLTDD KGNTIPGQVS VSPGV
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