| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3440 |
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| Symbol | |
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| ID | 5871226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3859901 |
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| End bp | 3860758 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641548556 |
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| Product | prophage antirepressor |
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| Protein accession | YP_001669667 |
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| Protein GI | 167034436 |
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| COG category | [K] Transcription |
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| COG ID | [COG3617] Prophage antirepressor |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000000105678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 9.66468e-17 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCACCAGA CCATCCAAAG CAATACCGTG GCCCTCGCGC CACAAAATGC GAACCACGAT
TTCGTGGCGC GCACAGTAAA CCTGTTCAAT TTCGAGGGGT TCGACGTTCG TGTCGTGCTC
GTTGATGGTG AGCCTTGGTT CTCTGCCCGT GATGTGGCTG AAGGTCTCGG CTACTCCAAT
CCACAAAAAG CCGTGCGCGA CCACTGCAAA AGCCCGCGCC CGGTGGGGGT GAACGATTCG
TTCACCCTTG GCCCGTCGGC AAACATCATC CCCGAGCGTG ACGTCTACCG GCTGGTAATG
CGCTCGAAGA TGCCTCAAGC CGAACGCTTT GAGGAATGGG TGGTGAGCGA AGTGTTGCCC
AGCATTCGCA AAACGGGTGG TTATACCGCC CCCGCCCAGC CCGCCGACCT CAGCAAGCTG
GAGATCCTCC AGATGGCCCT GGAGTCGGAG AAGGCCCGCG TCCTGCTCAC CGTCCAGGTC
GAGGCCCAGG CCAAGAAGAT CGACCACCTG GAGAACCTGT TCAAGGAAGG CATGAGCCAC
GTCCAGTTCT GCAAAGGCCT CAATGGGGTC AACGTGATGC AGGTTGGGCA CTTCCTCGAG
CGCCGCAACT GGCTCTACAA CGAAAGCAAG TCCGGTACCC GATACCGTGT GGCCGCCTAC
GCCCGCGACA AGTACATGAC CGAGCATCAG CAGGAGATCA CCCCGCACGG GAAAGAGGCG
TTCATCAGCT ACACGCCGAT CCTTCTGCGC AAGGGCGCCG TGCGCCTGTA CGAACTGTAC
CTGGCCGGCG AGCTTCCCAT GAAGAAGAAC TGGGACGGCC TGCACACCCA CGACAAGGCC
GTGCGGGGTG CAGCATGA
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| Protein sequence | MHQTIQSNTV ALAPQNANHD FVARTVNLFN FEGFDVRVVL VDGEPWFSAR DVAEGLGYSN
PQKAVRDHCK SPRPVGVNDS FTLGPSANII PERDVYRLVM RSKMPQAERF EEWVVSEVLP
SIRKTGGYTA PAQPADLSKL EILQMALESE KARVLLTVQV EAQAKKIDHL ENLFKEGMSH
VQFCKGLNGV NVMQVGHFLE RRNWLYNESK SGTRYRVAAY ARDKYMTEHQ QEITPHGKEA
FISYTPILLR KGAVRLYELY LAGELPMKKN WDGLHTHDKA VRGAA
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