Gene PputGB1_3440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3440 
Symbol 
ID5871226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3859901 
End bp3860758 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content60% 
IMG OID641548556 
Productprophage antirepressor 
Protein accessionYP_001669667 
Protein GI167034436 
COG category[K] Transcription 
COG ID[COG3617] Prophage antirepressor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000105678 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value9.66468e-17 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCACCAGA CCATCCAAAG CAATACCGTG GCCCTCGCGC CACAAAATGC GAACCACGAT 
TTCGTGGCGC GCACAGTAAA CCTGTTCAAT TTCGAGGGGT TCGACGTTCG TGTCGTGCTC
GTTGATGGTG AGCCTTGGTT CTCTGCCCGT GATGTGGCTG AAGGTCTCGG CTACTCCAAT
CCACAAAAAG CCGTGCGCGA CCACTGCAAA AGCCCGCGCC CGGTGGGGGT GAACGATTCG
TTCACCCTTG GCCCGTCGGC AAACATCATC CCCGAGCGTG ACGTCTACCG GCTGGTAATG
CGCTCGAAGA TGCCTCAAGC CGAACGCTTT GAGGAATGGG TGGTGAGCGA AGTGTTGCCC
AGCATTCGCA AAACGGGTGG TTATACCGCC CCCGCCCAGC CCGCCGACCT CAGCAAGCTG
GAGATCCTCC AGATGGCCCT GGAGTCGGAG AAGGCCCGCG TCCTGCTCAC CGTCCAGGTC
GAGGCCCAGG CCAAGAAGAT CGACCACCTG GAGAACCTGT TCAAGGAAGG CATGAGCCAC
GTCCAGTTCT GCAAAGGCCT CAATGGGGTC AACGTGATGC AGGTTGGGCA CTTCCTCGAG
CGCCGCAACT GGCTCTACAA CGAAAGCAAG TCCGGTACCC GATACCGTGT GGCCGCCTAC
GCCCGCGACA AGTACATGAC CGAGCATCAG CAGGAGATCA CCCCGCACGG GAAAGAGGCG
TTCATCAGCT ACACGCCGAT CCTTCTGCGC AAGGGCGCCG TGCGCCTGTA CGAACTGTAC
CTGGCCGGCG AGCTTCCCAT GAAGAAGAAC TGGGACGGCC TGCACACCCA CGACAAGGCC
GTGCGGGGTG CAGCATGA
 
Protein sequence
MHQTIQSNTV ALAPQNANHD FVARTVNLFN FEGFDVRVVL VDGEPWFSAR DVAEGLGYSN 
PQKAVRDHCK SPRPVGVNDS FTLGPSANII PERDVYRLVM RSKMPQAERF EEWVVSEVLP
SIRKTGGYTA PAQPADLSKL EILQMALESE KARVLLTVQV EAQAKKIDHL ENLFKEGMSH
VQFCKGLNGV NVMQVGHFLE RRNWLYNESK SGTRYRVAAY ARDKYMTEHQ QEITPHGKEA
FISYTPILLR KGAVRLYELY LAGELPMKKN WDGLHTHDKA VRGAA