Gene PputGB1_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3438 
Symbol 
ID5871224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3858186 
End bp3858992 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content64% 
IMG OID641548554 
ProductIstB ATP binding domain-containing protein 
Protein accessionYP_001669665 
Protein GI167034434 
COG category[L] Replication, recombination and repair 
COG ID[COG1484] DNA replication protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000228593 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value9.96626e-17 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCGCTCTG AGAAAGTCAC CCCGATCAAC CAGTCATCCC TTGTTGATCG CATCCAGCCA 
GCCGAGTGCG AGAAGCACGG CCCCTTCGAG CAGAAGGTCA CCATGCTGCT GGGCAAGGCT
CTGCGCAGCC ACTGCCCTGA ATGCGCTCGC ATTGCCAAGG AAGAGCGAGA GGCCCGCGCA
GAGGCCGAGC AGGCCCTGAA CGTGCGCCTG GCGATCTCCC GCAAGCTGGG AGACTCGCTG
ATCCCGAAAC GCTTCGCGGA TCGCTCCCTG GCGAACTACA GGGCAGAACA CAAGGGCCAG
GCCGAGGCGC TGCGCTTCTG CCGGCACTAC GTGAAGACCT TCGACCAGAT CGCCGAGAAC
GGGCGCTGCA TGGTGCTGCT GGGCAAGCCA GGCACCGGCA AGACTCACCT GGGCGCCGGT
ATGGCCAACG ACCTGATGCG CAACACCTCA CATTCAGCCG TGTACCGCAC TGTCGGCTCA
ATCCTGCAAG CCATCCGCGC CACCTACGAC CGTTCCAGCG AGGCGACCGA GGCCAGCATT
CTCGCCAGCC TGATCGAGCC ATCACTGCTG GTGCTGGACG AGGTAGGCGT GAGCAAGGAG
CAGCCCAGCG ACTTCGAGCT GACGACCCTG TTCGCGATCA TCAACGGCCG GTACGAGCAG
GTGAAGCCAA CGGTGGTCAT TTCCAACCTG GATGGCAGCC AGCTGCCAAT GGCCATGGGC
GAGCGCTGCG TCGACCGCCT GCGCGAGGGC GGGATGATCG TGGTCCCGTT CGAGTGGGAA
TCGCATCGTG GCAAGGAGGG CATCTGA
 
Protein sequence
MRSEKVTPIN QSSLVDRIQP AECEKHGPFE QKVTMLLGKA LRSHCPECAR IAKEEREARA 
EAEQALNVRL AISRKLGDSL IPKRFADRSL ANYRAEHKGQ AEALRFCRHY VKTFDQIAEN
GRCMVLLGKP GTGKTHLGAG MANDLMRNTS HSAVYRTVGS ILQAIRATYD RSSEATEASI
LASLIEPSLL VLDEVGVSKE QPSDFELTTL FAIINGRYEQ VKPTVVISNL DGSQLPMAMG
ERCVDRLREG GMIVVPFEWE SHRGKEGI