Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3423 |
Symbol | |
ID | 5871208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3852958 |
End bp | 3853389 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641548538 |
Product | 20S proteasome A and B subunits |
Protein accession | YP_001669650 |
Protein GI | 167034419 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.685692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 9.8653e-17 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGACCACTA TCGCCTACAA GGACGGCGTT ATCGCCTACG ACTCCCGCCA GACCCGCAGT GGCTCCATCG TTTCCGATGA CTGCCAAAAG CTCACCGTTG TGGATGGCGT CAGCTTCTTC CTGTCTGGTG CCGTGTGCGA CGAGAAGGCC CTGATTGCGG CCTACTTCGG CACGCCATCG CCGGTACCTG TCGAGTGCTC GGGCTACGTG GTGGATGGCG GCAGGCTGCA GATGGTGGGC CATGACGACA AGACTGGCAT CTGGCGGCAA GAGCTCGACC CAGCCAACCC TGATGCCATC GGCAGCGGCT CTCCCTATGC CCTGGCAGCG ATGGACATGG GCGCTAGCGC AGAAGAGGCG GTGCGCGCCG CCATGAAGCG GGACATCTAC ACCGGCGGGA AGGTCAGAAC GGTGACCATC AAGGGGCACT AA
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Protein sequence | MTTIAYKDGV IAYDSRQTRS GSIVSDDCQK LTVVDGVSFF LSGAVCDEKA LIAAYFGTPS PVPVECSGYV VDGGRLQMVG HDDKTGIWRQ ELDPANPDAI GSGSPYALAA MDMGASAEEA VRAAMKRDIY TGGKVRTVTI KGH
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