| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3415 |
|---|
| Symbol | |
|---|
| ID | 5871200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 3845578 |
|---|
| End bp | 3846522 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641548530 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001669642 |
|---|
| Protein GI | 167034411 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.994428 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 1.36254e-16 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACTA CCCTCAACTC GGACATGATC ATCTACAACG ATCTTGCCCA AACCGCCTAC
CTGGAGCGTC TGCAGGACGT GCTGGAGGTA TTCAATGCCT CGTCCGGTGG CGCGCTGATC
CTGCGTAACG AACTGATCGA GGGCGACCTC CGTAAGCGTT CGTTCTACAA GATTGGTGGC
AGCCTGGGGC ACCGCAACGT CAACTCCGAT GCCGCTGTGG CTGGCATCAA GATCGGCGCT
GACGAAGCGG TCGGCGTCAA AACCCCGTGG AAGTACGGCC CGTACGAAAC CACGGAGGAA
GCGTTCAAGC GCCGCGCGCG CAGCCCGGAA GAGTTCTCCA TGTTGGTTGG TCAGGACATG
GCCGACGCCG CCCTGGACTA CTACATCCAA ACTGCCTTCG CGTCCCTGGG CGCTGCCATT
GGCGCAAACG CCAACATGGT CGCCAGTGGC TCCTTCGCGG TCGACCACAA GAAGGTGCTG
ACCAAGGGCA TGCGCAAGTT CGGCGATCGC TTCAACCGCA TCGCGCTCTT CGCCATGGAC
TCCGCTACGT ACTTCGACCT GGTTGACGAC GCCATCGACC AGAAGATCTA CGAAGAGGCG
GGCGTGGTCA TCTACGGCGG CTCGCCGGGC ACCATGGGCA AACCGGTTCT CGTGTCCGAC
AAGGTCACCG AGGAGCGCAT CTTCGGCCTG CAGGTGGGTG CCGTTTCGGT AACTGAGTCC
CAGGCTCCGG GCGTGCGCTC CTACCCGGTG AACAACCAGG AAAACTTGGC GATTGGCTAC
CGCGCTGAAG GCGCTTTCAA CGTCGACATC ATGGGTTACT CCTGGAAGGA CACCGCAGGC
GTTAACCCGA ATCTCGCAGC CCTCGGCGCC GGGGCTAACT GGCGCAAGCA TGCGACCAGT
GACAAGGCTA CTGCCGGCGT CCTGATCGAC CTGTCCGCGC CTTAA
|
|---|
| Protein sequence | MATTLNSDMI IYNDLAQTAY LERLQDVLEV FNASSGGALI LRNELIEGDL RKRSFYKIGG
SLGHRNVNSD AAVAGIKIGA DEAVGVKTPW KYGPYETTEE AFKRRARSPE EFSMLVGQDM
ADAALDYYIQ TAFASLGAAI GANANMVASG SFAVDHKKVL TKGMRKFGDR FNRIALFAMD
SATYFDLVDD AIDQKIYEEA GVVIYGGSPG TMGKPVLVSD KVTEERIFGL QVGAVSVTES
QAPGVRSYPV NNQENLAIGY RAEGAFNVDI MGYSWKDTAG VNPNLAALGA GANWRKHATS
DKATAGVLID LSAP
|
|---|
| |