Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3404 |
Symbol | |
ID | 5871189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3839642 |
End bp | 3840247 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641548519 |
Product | hypothetical protein |
Protein accession | YP_001669631 |
Protein GI | 167034400 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0356557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 1.40429e-16 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | GTGACTACTA GGACGGCCGA AGAAGTCTTA GCGCTGAACA TCGAGTCGAT GGGCGAGCCA CTTGGAAGAG CGTTCTGGCA CCTTAATCAA CAAATTCTCC AGCTACATCT CGTTTGGGCG CAATACAAAC AGCTCTATGG AGAGAGCGAA GAGACGGTAC ATTTGCTCAA CGAGACCGCC GGCTTATTCT TCATGGTGGT CCAAGACAGC CTCTGGGATA CGGTCCTTCT TGGGATATGC AAGTTAACAG ATCCTGCCCA GACCTTTCAG AGCCAGAATC TTACGATCCG CTCGCTGCCA CCTCTGATCG CGGACCATGA CTTGTCTAAG CGTGTAAGCG GGCTGTGCGA TGAGGCAGTT TTGAAGGCTA AGTTTGCTCG AGTTCATCGT AACAAGCGAA TTGCCCACCA AGACAAAACT CATATCTTTG ATCGAGAGGC ACAACCGTTA GGTGGTATTA GCAGGAGACG TGTCAAAGAA ATGCTTCAAG CGATCACGGC AGTCATGAAT GCAGTTAACG GCTTTTACTT CGACTCTACG ATGTTCTACG ACGATATCGT CGCTGGAGGT GATGCAGCAT GGTTGGTGCA GAAGCTTAAA ACCTGA
|
Protein sequence | MTTRTAEEVL ALNIESMGEP LGRAFWHLNQ QILQLHLVWA QYKQLYGESE ETVHLLNETA GLFFMVVQDS LWDTVLLGIC KLTDPAQTFQ SQNLTIRSLP PLIADHDLSK RVSGLCDEAV LKAKFARVHR NKRIAHQDKT HIFDREAQPL GGISRRRVKE MLQAITAVMN AVNGFYFDST MFYDDIVAGG DAAWLVQKLK T
|
| |