Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3398 |
Symbol | |
ID | 5871183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3836111 |
End bp | 3836569 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641548513 |
Product | hypothetical protein |
Protein accession | YP_001669625 |
Protein GI | 167034394 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.000140118 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 1.23131e-16 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTCTGAGG TCACGAAGTA TCCAGTACAC AAGCAGGCGG TAGAGGACTT TCTCAAGGAG TTCAAGTACG GCGATCTTGT TGGCCATGAC TGGCTTGAGG CGCGATTCGG CATGCCGTCC ATTGGCGACT CCAAGTCGCT CACGGTAGAG CAGTTCCGCG AACGGCAGTT CGAGTGGCTT GCCAACGTCG AAGCATTCAA GGCAGAACTG CTGCGTGACC ACCAGGTGTG TCTGCAGTCG GTGCGTGGGC GCGGCTACCG CTGGGTTCCG CCGCATGAGC AGACTGGCGT GGCCATGGAA GAGCTTGGGC GCAACGTTCG CAAGGTTTTC CGCAGCACTG GGCAGAAGCT GAGAAATCTG CGAATCACTG AGCTGACCGA CGATCAGCGC CGGGATAACC TGGATCAGGT GGCGAAGTTC TCAGCGCTGC GCGGGATGGC AACTAAGACC TTGCGCTGA
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Protein sequence | MSEVTKYPVH KQAVEDFLKE FKYGDLVGHD WLEARFGMPS IGDSKSLTVE QFRERQFEWL ANVEAFKAEL LRDHQVCLQS VRGRGYRWVP PHEQTGVAME ELGRNVRKVF RSTGQKLRNL RITELTDDQR RDNLDQVAKF SALRGMATKT LR
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