| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3385 |
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| Symbol | |
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| ID | 5871170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3819053 |
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| End bp | 3819697 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641548500 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_001669612 |
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| Protein GI | 167034381 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00201071 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTAGACA TCACAAACCT GTGGTTATTT ATTCTGTCCG TCTTCCTGCT ATCTATAACT
CCTGGGCCGG ATATGGCTTA CGTTGTGGGC CAGAGCGTAG CCAACGGACG TCGCGCTGGG
GTAATTTCAG CGGCAGGCGT GGCGTTGGGA AGCTGTACCC ACGCCGTGGC TAGCGTGGTG
GGTCTTACTG CGCTGATTGC CGCATCGCCG CTCATGTTTT CAGCGGTCAA GTATGCGGGC
GCGCTCTATC TTATATACTT AGGCTCCAAG ATGATTATTG GAACCTTTAA CCAAAAAAGC
GCCGCGACTA TCGAGCAACC TCGAGTTAAA ATTAATGCCC CCCTAAAAGA TTTGCTCTCG
AAGGGTTTCA TCACAACACT TACAAACCCC AAAGTCCTTC TGTTCTTTGT CTCGTTCTTC
CCACAGTTTG TTGTGCCCAA CGGAGCGCAT CAGACAGAGT CGTTTCTGGT TTTAGGCTTG
GCATATGCTT TGGTAGCTTT CCTGACAGAT GCGATGTTCG CCTTGTTAGC AGGGAGCGCA
GCAGGCGCAG TCTCGCAAAA TAGATCATTG CAAAAGCTGA TGGATCGTGT TGTAGGCAGC
ACTTTTATTG CACTCGGAGT CCGACTCGCT TTCACTCGGC GTTAA
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| Protein sequence | MLDITNLWLF ILSVFLLSIT PGPDMAYVVG QSVANGRRAG VISAAGVALG SCTHAVASVV
GLTALIAASP LMFSAVKYAG ALYLIYLGSK MIIGTFNQKS AATIEQPRVK INAPLKDLLS
KGFITTLTNP KVLLFFVSFF PQFVVPNGAH QTESFLVLGL AYALVAFLTD AMFALLAGSA
AGAVSQNRSL QKLMDRVVGS TFIALGVRLA FTRR
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