| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3352 |
|---|
| Symbol | |
|---|
| ID | 5871137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 3772895 |
|---|
| End bp | 3773680 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641548468 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001669580 |
|---|
| Protein GI | 167034349 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCA TCGCCCACGC TTTACCCACC ACCGCCAGCA CTGGCGCGCT GACCATTCGC
GGCCTGAACA AGGCGTACCC GCTCAAAGGC AAGCCGGTAC CGGTGCTCGA AGGCATCGAC
CTGGCCATTC GCCCTGGCGA ATTCGTCAGC ATCCTCGGCG CCAGTGGCTG TGGCAAATCC
ACCCTGCTGC GGCTGATTGT CGGGCTCGAT CAGGACTACC AGGGGCAGAT CCTGCTGGAC
CAGCAACCCG TGCGCGGGCC AGGCCTGGAG CGCGGCATCG TGTTCCAGGA CCACCGCCTG
TTCCCTTGGA TGACCCTGCA GCAAAACATT GCCCTGGCCT TGAAAAACCA TGCGCTACCG
GCGCTGGAGA AGAACCGCCT GGTGGCCGAG CACATCGACC TGGTGGGCCT GAGTGGTTAC
GAGCAGGCCT ACCCGCACCA GTTGTCCGGC GGCATGGCCC AACGCGCGGC GATTGCCCGT
GCCCTGGTGA ACAAGCCCAA GGTGCTGTTG CTGGACGAAC CGCTTGGCGC CCTGGATGCA
CTGACCCGAG TGCGCTTGCA ACAGGAGTTG CAGCGCATTT GGGTACAGGA GCGCTGCACG
GTGATCATGG TGACCCACGA CATCGAAGAA GCGTTGTACC TGGGCGACCG GGTGATCGTC
ATGGATGCAC ACCCAGGGCG CATTCGCGAG GACCTGCGTA TCGACCTGCC GCACCCGCGC
CAGCGCGATA GCCAGGTGTT GCAGGGGTAC AAGCAACGGT TGCTGGGAGA ACTGGTGGGG
CAATGA
|
|---|
| Protein sequence | MNAIAHALPT TASTGALTIR GLNKAYPLKG KPVPVLEGID LAIRPGEFVS ILGASGCGKS
TLLRLIVGLD QDYQGQILLD QQPVRGPGLE RGIVFQDHRL FPWMTLQQNI ALALKNHALP
ALEKNRLVAE HIDLVGLSGY EQAYPHQLSG GMAQRAAIAR ALVNKPKVLL LDEPLGALDA
LTRVRLQQEL QRIWVQERCT VIMVTHDIEE ALYLGDRVIV MDAHPGRIRE DLRIDLPHPR
QRDSQVLQGY KQRLLGELVG Q
|
|---|
| |