| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3349 |
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| Symbol | |
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| ID | 5871134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3768720 |
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| End bp | 3771167 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641548465 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001669577 |
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| Protein GI | 167034346 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.51089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCACC ACACCCCCCT GGCCAGCGCC ATCGCCCTGG CCATCGCCGG CCTCGCCATG
CCCGCATTCG CCGCCGAACC CAACGACCGC CTCGACACCG TGGTCGTGGT CGGCACCCAT
CGCAGCGACG TCACCGCCCT GCAAAGCGCC GCGCCAGTCG ATGTGCTGAG CGGTGAAAAA
CTTCAGGAAA CCGGCGCCAG CGACCTGTCC GCAGCGCTTA CCGCGCTGTC ACCCTCGTTC
AGTTTCCCGC AGTCGCCCCA AGGCGCCTTT GCTGGTTCCA TTGCCCAAGG CGCCTCGCTG
CGCGGCCTGG CCTCGGACCA GGTACTGGTA CTGGTCAACG GCAAGCGCCG CCATACCAGC
GCCAACGTCA CCCGCCAGGG CCTGGTCAAC GCCCGTGGTG CGGCAGCAGT GGACCTCAGC
CTGATCCCGC TGTCGGCCAT CGAACGGGTG GAAATCCTGC GCGACGGCGC CGCTGCGCAA
TACGGTTCGG ACGCCATCGC CGGGGTGATC AACATCGTGC TCAAGGAGCG CGACGAAGGC
GGCAACGCCG GCTACCGCTT CGGTGGCTAC AAGAAAGGCG ACGGTCTGCA GCGCAAACTC
AGCGGTTGGA AGGGCTTTGC CCTGCCCAAC GACGGTTTCC TGACCCTGGC ATTCGACGCG
GGCAGCCAGG ACCCGGCCAG CGACACCCGC GACGACAACC GCCTGTTCTA CCCAGGCTCC
ACCAGCATCG ACACCCCGCG CGAGCAGAAC AACCGCTACC GCAACTGGCG CTGGGGCTCG
GGCAATGTCT CGGACCAGTA CAACTTTACC GCCAACGCTG AAATGGGTTT GAGCGAAGGC
TTGAGTGCCT ATGGCTTCGC CACCTATGCG CACAAGAACA CCGACGCCGA GAACTTCTTC
GACCCGCCGA CCACGTTGCG CAACAACTAC GGCAGCGTAG CCCTGGCGCG CTACCCGGAC
GGCCGCCTGC CAGTCACCCG CTACGGCCTG GAAGACTTTG CCGTCACCGG CGGCCTGCGT
TTTGAAAACG AAACCCTGGG CAACTTCGAC CTGGCGCTGA ACTACGGCGA CAACCGCGTC
GACTCCACCG ACCACGACGC CATCAACCCC AGCTGGGGCA CCGCCAGCCC GTCGACCATC
TACACCGGCC GCCGCGAAGC CGACCAGACC AACCTGACCC TGGACTGGAC CCGCGACTTC
GCCAACGCCT GGCTGTTCAA GCCGCTGACC GTGTCCGCCG GGCTGGCCTG GCGTCAGGAA
AACTACGACC TCAGCGAGGG CGACGCCGCC GGCTGGTCCA ATGGGCCATT GTTCAACACG
ATCGACCCTG TCACCGGCCG GCGTATCCCC GGCTACTACT CGGGCATCAC CCAGGTCGAT
GCGGTGTCGC TGGACCGCCG GGTGATCGGC GCCTACTTCG ATGTCGAAGC CCAGGTCACC
GAGAAATTCC AGGCCGGTGT GGCGGTGCGC AGCGAGCACT ATTCGGACTT TGGCGACACC
ACCAACGGCA AGTTGTCGCT GCGTTACGAC TTCACCCCGC AGATTGCCGC GCGGGCCAGC
GCCAGCACCG GCTACCGCGC GCCTTCACTG GTGCAAAGCG GGCTGTCGTC GTTCAGCGTG
CAGGTGGTGG AACAACCGCC GGGCAGCGGC AACTGGGTCG AGGTGCAGCA ACGCACCCTG
CGCGCCGACA GCCCCGAGGC CGCCTTGCTT GGCGGCAAGG CGCTGAAGCC GGAAGAGTCG
ACCAACTTCT CCGTGGGCCT GGTCTGGCGG CCACTGCCAA ACGCGTCGGT CACACTCGAT
GCCTACCGCA TCGACATCGA CAACCGCATT ACCTTGTCCG ACCAGTTGCC GGCTTCGGTG
GTCGGCCCGA TCTTCGCCGG TACGCCCTAC GCAAACATCC AGAGCGCGGC GTTCTACAGC
AACATCGCCG ACACCCGCAC CGATGGCTTC GAGCTGGCCG GCCACTACCA ACTGGACCTG
ACCGGCTGGG GCCGGTTGGA CTTAAACGGC GGCTACGCGC GCAACAATAC CCGCATCACC
GGCCTGGACG ACGTGGGCGG TATCCCCGGC AACCAGATCA TCGGCCGCAA CACCCAGGGC
CTGATCGAGG ACGGTACGCC CAAGGACAAG CTGACCCTCA GCGCCAACTG GCTGTATGAC
GGCTGGAGCG TCACCGTGGC CCAGCGCCGC TATGGCGAGT GGAAGAACCG CAACGCTGCC
AACCCGACGC TGGACCAGAC CTTCAGCCCG CAGTGGGTGA CCGACCTTGA CGTGTCATAC
CGTTTCGACC TGGGCCTGAC CTTGTCGGCG GGTGCGATCA ACCTGTTCGA CAGCCACCCG
GACAAGCTCA AGGGCGCACA GCTGTATGGC GTACCGAAAT ACTCCATCAC CAGCCCGGAG
GGGGCGCAGG GGGCGTTCTA CTACACCAGT GTGAGTTACG ATTTCTGA
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| Protein sequence | MPHHTPLASA IALAIAGLAM PAFAAEPNDR LDTVVVVGTH RSDVTALQSA APVDVLSGEK
LQETGASDLS AALTALSPSF SFPQSPQGAF AGSIAQGASL RGLASDQVLV LVNGKRRHTS
ANVTRQGLVN ARGAAAVDLS LIPLSAIERV EILRDGAAAQ YGSDAIAGVI NIVLKERDEG
GNAGYRFGGY KKGDGLQRKL SGWKGFALPN DGFLTLAFDA GSQDPASDTR DDNRLFYPGS
TSIDTPREQN NRYRNWRWGS GNVSDQYNFT ANAEMGLSEG LSAYGFATYA HKNTDAENFF
DPPTTLRNNY GSVALARYPD GRLPVTRYGL EDFAVTGGLR FENETLGNFD LALNYGDNRV
DSTDHDAINP SWGTASPSTI YTGRREADQT NLTLDWTRDF ANAWLFKPLT VSAGLAWRQE
NYDLSEGDAA GWSNGPLFNT IDPVTGRRIP GYYSGITQVD AVSLDRRVIG AYFDVEAQVT
EKFQAGVAVR SEHYSDFGDT TNGKLSLRYD FTPQIAARAS ASTGYRAPSL VQSGLSSFSV
QVVEQPPGSG NWVEVQQRTL RADSPEAALL GGKALKPEES TNFSVGLVWR PLPNASVTLD
AYRIDIDNRI TLSDQLPASV VGPIFAGTPY ANIQSAAFYS NIADTRTDGF ELAGHYQLDL
TGWGRLDLNG GYARNNTRIT GLDDVGGIPG NQIIGRNTQG LIEDGTPKDK LTLSANWLYD
GWSVTVAQRR YGEWKNRNAA NPTLDQTFSP QWVTDLDVSY RFDLGLTLSA GAINLFDSHP
DKLKGAQLYG VPKYSITSPE GAQGAFYYTS VSYDF
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