| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3320 |
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| Symbol | |
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| ID | 5871105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3727760 |
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| End bp | 3729610 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641548436 |
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| Product | hypothetical protein |
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| Protein accession | YP_001669548 |
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| Protein GI | 167034317 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.399338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAA TGCTCCGTCT GGCAGCTGTT CTGCTGCCTG TAACCCTGGC CTGGTGTAGC
CATGCCCACG CCTTCACCGA CGGCACCGAC CGTTCCGTCA CCCTGGAGAA GATCGCGCAG
ACGTTCGTGG TACAGAAAGA CGGCAGCTTC CGTCTGGATG TCGACAGCGT CATGCTGATC
AACGAAGACC GCGCCATCAA GACCAATGCC CAGCACCCGT TGAGCTACAA CCGGTCACTG
GAAACGCTGG AAGTGGTCGA GGCTTATACG CAAAAGCCCG ACGGGCGCAA AGTGCAGGTG
GATGCCGCGC ACATCAAGGA GCAGCAAGAG CAGGCGTCTG CCCAGGCACC GATGTTCCAG
GACTCGGTCA ACAAGGTGGT CATCTTCCCC GAGGTTGCGG TGGGTGACCG GCTGGTGCTG
CGTTATCAAC GTAACCGCTC TACGCCATTG TTCCCTGGGC AGTTCGAAGA CATCACCGTG
CCGCAGTTCT ACCCGGTCGG GCAGTTTTCG CTGACCTACG AGATGCCCCA GGGCATGCCG
CTGCAGGCCG ATGCCCGTGG TTTCAAGGCG TCGCCGCCTG CCACGAATGA TGGCCGTACA
GTGTATCGCT GGGACTATGT ACCGGGCGCG CGGGCGCGGA TCGAGACGGG GGCGGTGTCG
TACCTGGATT ACGGCCACTA CCTGGCAGTG TCGACGTTCT TAGGGTTCAA GGACTTCGCC
CAGGCCTATC AGACCAGGGC CACGGTCGAG GTCACCCCTC AGATCAGCGA GCTGGCGAAG
CGCCTGACCG CCGGTGTGCC CACAGCCCGG GAAAAGGCCC TGACCCTCAG TGATTGGGTG
CGCCAGAATA TCCGCTATGT GGCGGTGTAT GTCGGTGCTG GCGGGGTGGT GCCGCATGCC
GCGCAAACCG TGCTGGACAA CCGCTACGGC GACTGCAAGG ACCATGTTAC GCTGCTGGAG
GCGCTGCTGA GCGCGGCAGG TATCAGGAGC ACACCGGCGC TGGTGAACCA GGGCAACGCC
TATGTGTTCC CCAAAGTGCC GACCTTGGGT GTACTGAACC ATGTGATCAC CTATGTGCCG
AGCCTGGACT TGTACCTGGA CTCGACCGAC CCGTCGATCG CGGCGGGTTA CCTGCCGTTG
ACCGTGCTGA ACAAGCGCGT GCTGCTGACG GCCACCGGCG AGTTCGGCAA AACCCCGGCC
ATGCAGCTGA ACCAGGTTTC CAGTGATTTG CTGTTCAAGG TCAAGGCCGA TGGTGCCGCC
GACTTCACCA ACGTTTCCAC GGTGAAGGGC TGGGCCAGCG AGATGAGCCG CTTTGGCTTG
CAACTGATGA AACCGGCAGA CCGCGACATG CTGGTGGAAA AAGTGCTGGC CGCCTACGGC
CAGCGCGGCA GTGGTTCGTT CAAGGTCGCG CCGCCCGTGG GCAATGGCGA TTTTGTCAGC
ACCGTCGACG GGCGCACGGA AAACCTGGTC AACCTGCCAG GGCCGGTGGG CGTGGCGACC
CTGACCAGCC TGGCGGGCGG TATCTCGCAG AATGTGTACA GCTTCACCCT GGAAAAGGAC
CGCAGCCAGA GCTTTGTGTG CATTTCCAAC GACACGGTGG AAACGTCGCG CTTCGAGTTC
CCGGCCCAGG TCAACGTGCT GGCGATCCCC AAGCCTGTGA AGGTGCACGA TGGCAATGTC
GACTACAGCG CGCGTTACAC CCAGGATGGC AATGCGGTGG TGGTGGAGCG GCATTTCAAG
TTCAGCCGAC CGGATGTGGT TTGCACGCCA GAAGACTTCA CGGCCATGAA ACCGGCCCTG
GAGGCGATGA TCCGCGACCT GCAGAGCCAG ATCATCGTGC AGGCGGGGTA A
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| Protein sequence | MLKMLRLAAV LLPVTLAWCS HAHAFTDGTD RSVTLEKIAQ TFVVQKDGSF RLDVDSVMLI
NEDRAIKTNA QHPLSYNRSL ETLEVVEAYT QKPDGRKVQV DAAHIKEQQE QASAQAPMFQ
DSVNKVVIFP EVAVGDRLVL RYQRNRSTPL FPGQFEDITV PQFYPVGQFS LTYEMPQGMP
LQADARGFKA SPPATNDGRT VYRWDYVPGA RARIETGAVS YLDYGHYLAV STFLGFKDFA
QAYQTRATVE VTPQISELAK RLTAGVPTAR EKALTLSDWV RQNIRYVAVY VGAGGVVPHA
AQTVLDNRYG DCKDHVTLLE ALLSAAGIRS TPALVNQGNA YVFPKVPTLG VLNHVITYVP
SLDLYLDSTD PSIAAGYLPL TVLNKRVLLT ATGEFGKTPA MQLNQVSSDL LFKVKADGAA
DFTNVSTVKG WASEMSRFGL QLMKPADRDM LVEKVLAAYG QRGSGSFKVA PPVGNGDFVS
TVDGRTENLV NLPGPVGVAT LTSLAGGISQ NVYSFTLEKD RSQSFVCISN DTVETSRFEF
PAQVNVLAIP KPVKVHDGNV DYSARYTQDG NAVVVERHFK FSRPDVVCTP EDFTAMKPAL
EAMIRDLQSQ IIVQAG
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