| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3319 |
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| Symbol | |
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| ID | 5871104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3726847 |
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| End bp | 3727737 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641548435 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001669547 |
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| Protein GI | 167034316 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.159195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCCG TCTTGCCCTT GCTTGCCTTG CGCGCGTTCA CCGAAACAGC ACGTCTTGGC
ACCTTGAAAG CCGCCGCCGA GCATATGGGG GTGACGCCGG GCGCGATTAG CCAGCAGATA
CGCCTGCTCG AGGAGCGCCT GGGCGTCACG CTGCTGGTAC GCACCCGACA GGGCGTGCAA
CTGACCGACG CCGGCACCAC GCTGTATCCG GGCTTGTCAC GCGGCTTCGG GCAGATCGAA
AGCGCCTTGG CCGAACTGCA AACCGTGGCC CGCACGCCCA CCCTGACCGT CAGCACCGTG
CCTGCCTTCG CCGCGACCTG GCTGGTACCG CGCCTGGGCG ATTTCAATGC CCGCCACCCG
GACATCGAGG TGCGGGTAGA GGCGTCAGCG AAGCTGGTGG ACTTGCAACG CGACCGCGTC
GATGTGGCGC TGCGTCATGG CCTGGGGCAT TACCCTGGGC TGCAGAGCAT CGCCCTGATG
GCACCTGTGC TGTTGCCGGT GGCAAGCCCT GCGCTGCTGG CCAGCGGGCC AGCGATCGAA
GCCCCCGCGG ACTGCCTGTA TTATCCGTTG CTGCAAGATG GCGAACGTGC CGACTGGCCC
TTGTGGCTGC AGGCGCATGG TTGCACCGTG GATGGCCGCT GCAGCCGCGG CCCGAGCTTC
GATGAAGACC TGCTGCTGTT GCGTGCCGCG CTGGCTGGGC AAGGTATTGC GCTGGTGCAG
GACCACCACG CGCAAGAAGA CCTGCGCAGC GGCAGGCTGG TGGTAGCGGT GGACAGGCCA
TGGCCGGCGC GGTTCGCCTA CTATGCCGTG GCCCACCAGC AAGCACTGAA ACGCCCGCAG
GTGCGGGCGT TCATAGACTG GGTCACAGAC CAGGCACTGG GCAAATGGTG A
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| Protein sequence | MGAVLPLLAL RAFTETARLG TLKAAAEHMG VTPGAISQQI RLLEERLGVT LLVRTRQGVQ
LTDAGTTLYP GLSRGFGQIE SALAELQTVA RTPTLTVSTV PAFAATWLVP RLGDFNARHP
DIEVRVEASA KLVDLQRDRV DVALRHGLGH YPGLQSIALM APVLLPVASP ALLASGPAIE
APADCLYYPL LQDGERADWP LWLQAHGCTV DGRCSRGPSF DEDLLLLRAA LAGQGIALVQ
DHHAQEDLRS GRLVVAVDRP WPARFAYYAV AHQQALKRPQ VRAFIDWVTD QALGKW
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