| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3313 |
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| Symbol | |
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| ID | 5871098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3717602 |
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| End bp | 3718507 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641548429 |
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| Product | catechol 1,2-dioxygenase |
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| Protein accession | YP_001669541 |
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| Protein GI | 167034310 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0277035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTAG CGATATCCCA TTCCCCCGAC GTGCAGGCCT TTTTCGCCAA GGCCGCAGGC
ATTGGCAACG ACCAGGGCAA CCCACGCCTG AAGCAGGTCG TGCTGCGCAT CCTGCAGGAC
AGCGCCAGGC TGATCGAAGA CCTGGCGATC AGCGACGACG AATTCTGGCT AGCGGTGGAC
TACCTCAATC GCCTGGGCGG GCGCAACGAA GCGGGCCTGC TGATGGCGGG GCTTGGCCTG
GAGCACTTCC TCGACCTGCT CAGCGATGCC CGCGATCGCC AGGCCGGCTA TGCCGGCGGT
ACACCGCGCA CCATCGAAGG CCCGTTGTAC GTGGCTGGCG CGCCGCTGTG CGAAGGCGAA
GCTCGGCTGG ACGATGGCCA CGACCTGGGC CAGCCAATGC TGCTCGAAGG CCAGGTGCTG
GACGTGCACG GCAAACCGCT GGCCGGGGCC ATCGTCGATG TGTGGCACGC CAATACCCAG
GGGCTGTACT CCTACTTCGA CACCAGCCAG GCCGAGTACA ACCTGCGCCG GCGTATCCGC
ACGGATGCCC AGGGCCGCTA TCGCGCCCGC AGCATCGTAC CCAGCGGCTA TGGCTGCCCG
GCCGACGGGC CGACCCAAGC CTGCCTGGAC CAGTTGGGCC GCCATGGCCA GCGGCCCGCG
CATATCCACT TTTTCATCAG CGCACCGGGG TATCGGCACC TGACCACGCA GATCAACCTG
GCGGGGGACG AATATTTGTG GGATGACTTT GCCCATGCCA CCCGTGACGG GCTGGTGGGT
GAGGTTGAAC AGCTTGCGGA CGGAGTGGCG CGGGTGGTGT TCGATTTTTG CCTGCAGGCG
GCGGCCAGCG CCGATGATGA ACAGCGCAGC CAGCGGCCTC GGGCTTTGCA AACAAGTACC
GATTGA
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| Protein sequence | MTVAISHSPD VQAFFAKAAG IGNDQGNPRL KQVVLRILQD SARLIEDLAI SDDEFWLAVD
YLNRLGGRNE AGLLMAGLGL EHFLDLLSDA RDRQAGYAGG TPRTIEGPLY VAGAPLCEGE
ARLDDGHDLG QPMLLEGQVL DVHGKPLAGA IVDVWHANTQ GLYSYFDTSQ AEYNLRRRIR
TDAQGRYRAR SIVPSGYGCP ADGPTQACLD QLGRHGQRPA HIHFFISAPG YRHLTTQINL
AGDEYLWDDF AHATRDGLVG EVEQLADGVA RVVFDFCLQA AASADDEQRS QRPRALQTST
D
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