Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3299 |
Symbol | |
ID | 5871084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3699430 |
End bp | 3700209 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641548415 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001669527 |
Protein GI | 167034296 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCC TGCACATTCG CGAGCACTGG ATCGACACCT CGTCAGGCAA GCTGTTCGCC CAGCAGTGGG TGCCGCTGCA GGCACAGGGG GCGCCTATCG TCCTGTTGCA CGATTCGCTG GGTTGCGTGG CCTTGTGGCG CGACTTCCCG GCGCAGCTGG CGCAGGCTAC CGGGCACCGG GTGATCGCTT ACGACCGCTT GGGCTTCGGT CGTTCCGACG CACACCCCGG CAGGTTACGC CTGGGCTTTG TCGAGAACGA GGCGCAGCAG GGCTTCACGG CCCTGCGCGA GTACTTTGAC ATAGCTGATT TCATTGTCTT CGGTCACAGC GTTGGCGGCG GAATGGCCGT GGCCTGCGCT GCGGCATTCG CCAGCCAGTG CATGGGGTTG ATCACCGAGT CGGCGCAGGC CTTTGTCGAA GCCCGCACAC TTGAAGGCAT TCGGTCAGCG GACCAGCAGT TTGCCGAGCC TGGGCAACTG CAGCGGCTGG AGCGCTACCA CGGCAGCAAG GCCCAATGGG TACTGCGCGC CTGGGTGGAC AACTGGCTGG CCGAGGATTT TGCCGACTGG AACCTGGATA CCGTTTTGGC GCAGGTTCGC TGCCCCTTGT TGAGCCTGCA TGGCGATAAC GACGAGTTTG GCTCGTCGGC GCACCCCGAA CGACTGGTGG CGCTGGCGGG TGGGCCTGGG GTGGCGCGAC TGCTGCAAGG CTGTGGGCAT GTGCCACACC GGGAGCAGGC AGAGGTGGTG CTGGCGGAGG TCGTGCAGTT CTTGCGGTAA
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Protein sequence | MSGLHIREHW IDTSSGKLFA QQWVPLQAQG APIVLLHDSL GCVALWRDFP AQLAQATGHR VIAYDRLGFG RSDAHPGRLR LGFVENEAQQ GFTALREYFD IADFIVFGHS VGGGMAVACA AAFASQCMGL ITESAQAFVE ARTLEGIRSA DQQFAEPGQL QRLERYHGSK AQWVLRAWVD NWLAEDFADW NLDTVLAQVR CPLLSLHGDN DEFGSSAHPE RLVALAGGPG VARLLQGCGH VPHREQAEVV LAEVVQFLR
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