Gene PputGB1_3299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3299 
Symbol 
ID5871084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3699430 
End bp3700209 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content65% 
IMG OID641548415 
Productalpha/beta hydrolase fold 
Protein accessionYP_001669527 
Protein GI167034296 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCC TGCACATTCG CGAGCACTGG ATCGACACCT CGTCAGGCAA GCTGTTCGCC 
CAGCAGTGGG TGCCGCTGCA GGCACAGGGG GCGCCTATCG TCCTGTTGCA CGATTCGCTG
GGTTGCGTGG CCTTGTGGCG CGACTTCCCG GCGCAGCTGG CGCAGGCTAC CGGGCACCGG
GTGATCGCTT ACGACCGCTT GGGCTTCGGT CGTTCCGACG CACACCCCGG CAGGTTACGC
CTGGGCTTTG TCGAGAACGA GGCGCAGCAG GGCTTCACGG CCCTGCGCGA GTACTTTGAC
ATAGCTGATT TCATTGTCTT CGGTCACAGC GTTGGCGGCG GAATGGCCGT GGCCTGCGCT
GCGGCATTCG CCAGCCAGTG CATGGGGTTG ATCACCGAGT CGGCGCAGGC CTTTGTCGAA
GCCCGCACAC TTGAAGGCAT TCGGTCAGCG GACCAGCAGT TTGCCGAGCC TGGGCAACTG
CAGCGGCTGG AGCGCTACCA CGGCAGCAAG GCCCAATGGG TACTGCGCGC CTGGGTGGAC
AACTGGCTGG CCGAGGATTT TGCCGACTGG AACCTGGATA CCGTTTTGGC GCAGGTTCGC
TGCCCCTTGT TGAGCCTGCA TGGCGATAAC GACGAGTTTG GCTCGTCGGC GCACCCCGAA
CGACTGGTGG CGCTGGCGGG TGGGCCTGGG GTGGCGCGAC TGCTGCAAGG CTGTGGGCAT
GTGCCACACC GGGAGCAGGC AGAGGTGGTG CTGGCGGAGG TCGTGCAGTT CTTGCGGTAA
 
Protein sequence
MSGLHIREHW IDTSSGKLFA QQWVPLQAQG APIVLLHDSL GCVALWRDFP AQLAQATGHR 
VIAYDRLGFG RSDAHPGRLR LGFVENEAQQ GFTALREYFD IADFIVFGHS VGGGMAVACA
AAFASQCMGL ITESAQAFVE ARTLEGIRSA DQQFAEPGQL QRLERYHGSK AQWVLRAWVD
NWLAEDFADW NLDTVLAQVR CPLLSLHGDN DEFGSSAHPE RLVALAGGPG VARLLQGCGH
VPHREQAEVV LAEVVQFLR