| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3296 |
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| Symbol | |
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| ID | 5871081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3695887 |
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| End bp | 3697566 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641548412 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001669524 |
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| Protein GI | 167034293 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTTC TCGACAGCGC ATCCACGGGC AGTAGCGCGC CCCAACGCGG TATCACCAAG
GAGGAGCGCA AGGTCATCTT CGCCTCGTCC CTGGGCACGG TGTTCGAATG GTACGACTTC
TACCTGTACG GTTCTCTCGC CGCGATCATC GCCAAGCACT TCTTTGCCGG GGTCAATGAA
ACCACCTCGT TCATCTTCGC GCTGCTGGCT TTCGCCGCCG GGTTTGCGGT AAGGCCGTTC
GGCGCCATCG TGTTCGGCCG GCTGGGCGAC ATGATCGGGC GCAAGCATAC CTTCCTGATC
ACCATTGTCA TCATGGGCCT GTCGACCGCA CTGGTGGGCT TGCTACCCAG CTACAGCGCG
ATTGGCGTGG CTGCGCCGGT CATCCTGATT ACCCTGCGCC TGCTGCAAGG CCTGGCCCTG
GGTGGTGAAT ACGGCGGCGC GGCCACTTAT GTGGCCGAAC ATGCACCCAA GGGCCGACGG
GGCTTCTTCA CCGCCTGGAT CCAGACCACG GCCACGTTGG GGCTGTTCCT GTCGTTGCTG
GTGATCATGG CGTGCCGCAC CGTCATGGGC ACCGAGGTGT TCGAAGCTTG GGGTTGGCGG
GTGCCGTTCC TGTTGTCGAT CTTGCTGCTG GCGATTTCGG TGTACATCCG CATGCAGCTC
AACGAGTCGC CGGTGTTCAT GAAGATGAAG GCCGAAGGCA AGGCGTCCAA GGCACCGCTG
ACCGAGTCGT TCGCCCGCTG GGACAACCTC AAGGTGGTGA TCATGTCGCT GCTGGGCGGT
ACCGCAGGGC AGGCGGTGGT GTGGTACACC GGGCAGTTCT ATGCGCTGTT CTTCCTGTTG
CAGATGCTCA AGATCGAGCC GCAGACCGCC AACCTGCTGA TTGCCGGCTC GCTGCTGATC
GGCACGCCGT TCTTCATCTT TTTCGGTAGC TTGTCTGACC GCATTGGCCG CAAGAAGATC
ATCATGGCCG GCTGCATCAT CGCCGCGCTG ACCTATTTCC CGATCTTCAA GGCGTTGACC
GAGTACGGCA ACCCGGATGT GTTCGTTGCC CAGGAGCAGA ACCCGGTCGT GGTGGTGGCC
GACCCTGGCC AGTGCGCATT CCAGTTCGAC CCGGTGGGCA AGGCCAAATT CACCAGCTCC
TGCGACATTG CCAAGAGCCT GCTGGCCAAG CGCGCCATTC CCTATACCAA CCAGGCGGCC
GAGCCTGGCA GTGTGGCGCA GATCCGCATT GGTGAGCGGG TACTGCCCAG CTTTGAAGGC
AGCAGCATGG CCGCCGCGGA CTTCAAAGTG CAGAGCGAGG CCTTTACCGC CACCTTGAGT
GGTGCGTTGA AAGAGGCCGG CTACCCGGAA AAGGCCGACC CGGCGAAGAT CCACTACCCG
ATGGTGCTGT TGCTGCTGAC CCTCCTGGTG ATCTACGTGA CCATGGTCTA CGGCCCGATC
GCCGCCTGGC TGGTGGAGCT GTTCCCGGCG CGTATCCGCT ACACCTCGAT GTCGCTGCCT
TACCACATCG GTAATGGCTG GTTCGGCGGT TTTCTGCCGA CGGTCGCGTT TGCCATGGTG
GCGGCGACCG GGGATATCTA TTACGGCTTG TGGTACCCGA TCGTGATTGC GGTGATGACA
GCGGTGCTGG GGATCTTCTT CCTGCCGGAA ACCAAGGACC GTGATATCAA CCACACCTGA
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| Protein sequence | MAVLDSASTG SSAPQRGITK EERKVIFASS LGTVFEWYDF YLYGSLAAII AKHFFAGVNE
TTSFIFALLA FAAGFAVRPF GAIVFGRLGD MIGRKHTFLI TIVIMGLSTA LVGLLPSYSA
IGVAAPVILI TLRLLQGLAL GGEYGGAATY VAEHAPKGRR GFFTAWIQTT ATLGLFLSLL
VIMACRTVMG TEVFEAWGWR VPFLLSILLL AISVYIRMQL NESPVFMKMK AEGKASKAPL
TESFARWDNL KVVIMSLLGG TAGQAVVWYT GQFYALFFLL QMLKIEPQTA NLLIAGSLLI
GTPFFIFFGS LSDRIGRKKI IMAGCIIAAL TYFPIFKALT EYGNPDVFVA QEQNPVVVVA
DPGQCAFQFD PVGKAKFTSS CDIAKSLLAK RAIPYTNQAA EPGSVAQIRI GERVLPSFEG
SSMAAADFKV QSEAFTATLS GALKEAGYPE KADPAKIHYP MVLLLLTLLV IYVTMVYGPI
AAWLVELFPA RIRYTSMSLP YHIGNGWFGG FLPTVAFAMV AATGDIYYGL WYPIVIAVMT
AVLGIFFLPE TKDRDINHT
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