Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3289 |
Symbol | |
ID | 5871074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3689762 |
End bp | 3690406 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641548405 |
Product | paraquat-inducible protein A |
Protein accession | YP_001669517 |
Protein GI | 167034286 |
COG category | [S] Function unknown |
COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAACCC CGGCCAACGC AGACGACCTT GGCTTGTGCC TGTGTCATGG CTGCGGCCAG GCCTGCGACA TGAGTGGCGG TGCGCACACC TGCAACCGTT GCGGCGCGGC CATTCACCGA CGCAAGAGCA ATGCCATCAG CCGTGGCTGG GCGTTTCTGC TGGCGGCGCT GGTGTTCTAT ATCCCCGCCA ACCTGCTGCC GGTGATGCAC ACCGAAATGC TCGGCAGTGG CAGCGACAGC ACCATTGGCG GTGGTGTGCT GGAATTCTGG GAAGCTGGGG CCTGGGACAT TGCGCTGATC ATCTTCATTG CCAGCGTGGG TGTGCCCGCG ATCAAGTTTT TCTCCCTCGG CCTGCTGCTG TACACCGCCC AGCGTGGTTC CACCTGGGCT TGCCGACAGC GTTCGCAGTT GTACCGCTTC GTCGAGCTGA TCGGCTACTG GTCCATGCTC GACGTGATGG TGGTGGCGCT GGTGGCGGCG CTGGTGCAAC TGCGCGGGCT GGGCACCATC GAGCCACGGG TGGGTATCCT GTTTTTTGGC ATGGTGGTGG TGCTGACCAT GTTCTCTGCA ATGAGCTTCG ATCCACGCCT GATCTGGGAT AGCCATGCCA ACGAGGGAGG CCGCATTGAT GGGGCAACAG ACTGA
|
Protein sequence | MTTPANADDL GLCLCHGCGQ ACDMSGGAHT CNRCGAAIHR RKSNAISRGW AFLLAALVFY IPANLLPVMH TEMLGSGSDS TIGGGVLEFW EAGAWDIALI IFIASVGVPA IKFFSLGLLL YTAQRGSTWA CRQRSQLYRF VELIGYWSML DVMVVALVAA LVQLRGLGTI EPRVGILFFG MVVVLTMFSA MSFDPRLIWD SHANEGGRID GATD
|
| |