Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3288 |
Symbol | |
ID | 5871073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3688138 |
End bp | 3689778 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641548404 |
Product | hypothetical protein |
Protein accession | YP_001669516 |
Protein GI | 167034285 |
COG category | [R] General function prediction only |
COG ID | [COG3008] Paraquat-inducible protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCAAC AGACTGACAA GCGCGACGGT ACAGGTCAGG TTGACGTGCG CACACGGCGC TGGGGGGTGT CGCTGGTCTG GATCGTGCCG ATTCTGGCTA TCCTGATCGG CGCATCGCTA GTGGTACGCA ACTGGATGCA GCAAGGGCCG GTGATCACCA TTTCCTTCCA CAGCGGGGAG GGGTTGGTGG CGCACAAGAC CCAGGTGAAA TACCGCAGCG TGGTGATTGG CGAAGTGACC ACGGTGGACC TGGCCGAGGA CAAGAAGAGC GTGGTGGCCA ACGTGCAGCT GTCCAACGAT GCCCGCTCTT TTGCCACCCA GGGCGCGCGC TTCTGGGTGG TGCGACCGCG CATCGGCGTA GGCGGGGTTT CCGGGGTGGA CACGCTGCTT TCGGGCAGTT TCATCGGGGC TGATTCCGGT GAGTCGAAAG TGCCGGAAAA GTCCTTCGTC GGGCTGGAGC TGCCGCCGCC GATCACCTAT GACGAAAAGG GCAAGCGTTT TGTCCTTACC GCCAGCGATC TGGGCTCGCT GGATGTCGGC TCATCGATCT ACTACCGCAA GATCCCGGTC GGTGAAGTGG TCTCTTTTGC GCTGCAGGAC GATGGCAAGG GCGTGGAGAT TGGCGTGTTC GTGCAAGCCC CCTACGACAG CTTCGTCACC GCCGACACGC GCTTCTGGAA TGCCAGTGGT GTCGATATGC AGATTGGCGC CAACGGGCTG AAGGTCGATA CCGAGTCGTT ATCATCGATC CTGGTGGGGG GGCTGGCCTT TGGTTCGCCC GATTTCGCCC CGCAAGCCGA GCCAGCTGCC GACCAGGCCC GCTTCCAGCT ATTTGCCGAC CGCGACTTGG CGCTGGCCCC TCCCCACGGC CAGGCGCAGT ACCTGCAACT GCGCTTCGAC CAGGCCATGC GCGGCTTGTC GGTGGGTGCG CCGGTGGAGT TCAAGGGTGT GGAGTTTGGG CGTGTTACCT CTATTCAGCT CGATTACGAC GCCGCCAGGC AGACCTTCCC GGTAGTGGTG GATGCAGTAA TCTACCCGCA GCGCCTGGGG CCGGTGCACC GCAAGATGCT GGCGGTGTTC AAGCACACCG AAGGCGACAT GGATGGTGCG CGGGAGCTGA TCGGCACGTT TGTCGAGCAT GGCCTGCGGG CCCAGGCGCG CAGCGGCAAC CTGATCACCG GGCAGATGTT CATTTCCCTG GATTTCTACC CCGATGCCCC CAAAGTCGCC TTCGACATGG CCGCCAACCC CATCATCATC CCCACGTTGC CGGGTAGCCT GGAGCAGTTG CAGGAGCAGC TGCAGCGGGT CGTGGAACGC ATTGCCAAGC TGCCGCTGGA AAGCATCGCC GGCAACCTCG ACGGCAGCCT GCGTGAGCTG CGCGCCAGCC TCAAGCAATT CAATGGCCAG ACACTGCCGG ATGTAAAAGT GGCGCTGGAC GAAGTGCACA AGACCCTGCG CACCGCCAAC TCGGCCATTT CCGAGGACTC GCCGCAGCGC GAGCGAATGG GCGAAACACT GGATGAGCTG GAACGCATGT CACGTTCGCT GCGTGACCTT GCCGATTACC TGGGCCGCCA CCCCGAGTCA CTGATTCGTG GCCGGCCGAA AGCGGCCGGG CCCGCAGACC TTGAGCCCTG A
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Protein sequence | MGQQTDKRDG TGQVDVRTRR WGVSLVWIVP ILAILIGASL VVRNWMQQGP VITISFHSGE GLVAHKTQVK YRSVVIGEVT TVDLAEDKKS VVANVQLSND ARSFATQGAR FWVVRPRIGV GGVSGVDTLL SGSFIGADSG ESKVPEKSFV GLELPPPITY DEKGKRFVLT ASDLGSLDVG SSIYYRKIPV GEVVSFALQD DGKGVEIGVF VQAPYDSFVT ADTRFWNASG VDMQIGANGL KVDTESLSSI LVGGLAFGSP DFAPQAEPAA DQARFQLFAD RDLALAPPHG QAQYLQLRFD QAMRGLSVGA PVEFKGVEFG RVTSIQLDYD AARQTFPVVV DAVIYPQRLG PVHRKMLAVF KHTEGDMDGA RELIGTFVEH GLRAQARSGN LITGQMFISL DFYPDAPKVA FDMAANPIII PTLPGSLEQL QEQLQRVVER IAKLPLESIA GNLDGSLREL RASLKQFNGQ TLPDVKVALD EVHKTLRTAN SAISEDSPQR ERMGETLDEL ERMSRSLRDL ADYLGRHPES LIRGRPKAAG PADLEP
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