| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3286 |
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| Symbol | |
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| ID | 5871071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3686167 |
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| End bp | 3687459 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641548402 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001669514 |
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| Protein GI | 167034283 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.92018 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCACGA CCTACCGCGC GCTGTTCCAG TCACGCGGCA CCCTTGGCTT TACCCTGGCT
GGTCTGTTGG CCCGCCTGCC GTTGCCCATG ACCGGCATCG GTATCATCAC CATGCTCGCG
CAACTGCACG GCAGCTACGC CCTGGCCGGA GCGGTGGCGG CCACGTTCGT GCTGACCTAC
GCACTGCTGT CGCCACAGGT TTCCCGTCTG GTCGATCGCC ATGGCCAGCG CCGCGTGTTG
CCGGCCGCCA CCGCGCTGAG CGTGGCCGGT TTGTTGTTGC TGCTGGCGTG CGTCACCTGG
CAGGCGCCGG CCTGGTGCCT GTTCCCCGCT GCAGCGCTGG CCGGCTGCAT GCCCAGCCTG
TCGGCAATGG TACGGGCGCG CTGGACGGCG CTGTACCGCG ATACGCCACA GCTGCAGAGT
GCCTTTTCGC TGGAAACGGT GTTCGATGAG GTCACGTTCA TCGCCGGCCC GCCCCTGTCG
GTCGGGCTCA GCGTGGCCTT GCTGCCCCAG GCCGGGCCAT TGGCCGCCGC GCTGTTGCTG
GCCATCGGGG TATTCGCCTT GGTCGTGCAA ACGGGCAGCG AACCCCCGCT GCAGGCTGAT
GACTCGACCG GCCACCAGCG GGTTGCGGTG ATCGCTCAGG CGGACGTGCG CCTGCTGGTC
CTGTTGATGG TGGCCATGGG CGTGATCGTG GGCAGCGTCG ATATCGTCAG CGTGGCATTC
GCTGAACAGG CCGGCATGCC GGCGGCAGCC AGTGTCGTGC TGTCGTGCTA TGCCATTGGC
TCGTGCGCGG CGGGCCTGCT GTTCGGTGCC GTGAATCTGG CGGCGCCTTT GCACAGGCTG
TTGTTGCTCG GCGGCCTGGC GACGGCGGCC AGTACCGTGC CGCTACTGTT GGCAGGCAAC
CTGTTCGGGT TGGCTGCTGC CGTGTTGCTG GCCGGGCTGT TTTTCGCACC AACCCTGATC
GTGGCCATGG CCCTGGTGGA GCGTCTGGTG CCCGCCAGCC AACTGACCGA AGGCATGACC
TGGCTGCTGG CCGGCTTGAA TGTTGGCGTG GCATTGGGCG CTGTGGCGTC AGGGCAGGTG
GTCGACGGGT TGGGCGCCAG CGCCGGTTTC CAGGTGGCGT TGGCGGCCGG GGCGTTGGTG
TTGCTGGTTG CCCTGTGGGG CTATCGGCGC TTTGCTCAGG CTCGCCGCAG CGGCACCTCG
CGCAGCAACC AGGACAGTGC GAAGGCCACG CTGGTGATCC CCCCAGCCAG CATGAACACG
CCATGCATCG CCCCGGAAAA CGCCAGCAGG TAA
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| Protein sequence | MFTTYRALFQ SRGTLGFTLA GLLARLPLPM TGIGIITMLA QLHGSYALAG AVAATFVLTY
ALLSPQVSRL VDRHGQRRVL PAATALSVAG LLLLLACVTW QAPAWCLFPA AALAGCMPSL
SAMVRARWTA LYRDTPQLQS AFSLETVFDE VTFIAGPPLS VGLSVALLPQ AGPLAAALLL
AIGVFALVVQ TGSEPPLQAD DSTGHQRVAV IAQADVRLLV LLMVAMGVIV GSVDIVSVAF
AEQAGMPAAA SVVLSCYAIG SCAAGLLFGA VNLAAPLHRL LLLGGLATAA STVPLLLAGN
LFGLAAAVLL AGLFFAPTLI VAMALVERLV PASQLTEGMT WLLAGLNVGV ALGAVASGQV
VDGLGASAGF QVALAAGALV LLVALWGYRR FAQARRSGTS RSNQDSAKAT LVIPPASMNT
PCIAPENASR
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