| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3280 |
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| Symbol | |
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| ID | 5871065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3678013 |
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| End bp | 3680421 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641548396 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001669508 |
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| Protein GI | 167034277 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.118195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.578199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGTAC GTCCCTCACT TCTTGCCCTG AGCCTGACCG GCTCGTTGTT GGTGGTCACG
CCCGCCTGGG CCATCGCCTA CGACATTCCG GCTGGCAGCC TGGCGGCATC GCTCAGTCAG
TTCGCCGCCG CGAGCGGGGT CATGATCACC TTCAGTTCGC AAGACACTGC CGGCCTGCGC
TCGCCAGGCC TGCAAGGTGA CTATGAGCTG GAGCAGGGCT TTGCCCGCCT GCTCCAAGGT
AGCGGCCTGC GCGTCGTGCA GGCCGGGGAG AAGCGCTACG TATTGGCCAG GGCCGACAGC
AGTGGGGCCA TGGAGCTTGG TGCAACCAAC ATCGACGCGG CGGGCCTGGG GGCTGTCACG
GAAGGAACCG GCTCCTACAC CACCGGTTCC AGCAACAGTT CGACCAAACT GGCGTTGTCG
CTGCGCGAAA CCCCGCAGAC CGTCAGCGTG ATGACGCGCC AGCGCATCGA AGACCAGCAA
CTGAACACCC TCAGTGACGT GCTCAAGCAA ACCCCTGGCC TGAACGTGCA GAACATCGAC
AGCGAGCGGG TGAACATCTA CTCGCGTGGC TATTCGATCG ACAACTACCA GTTTGACGGT
ATCCCCACCA CCCTGATCGT GCAGACCAGT GCCAGCCCGC AGAGCATGAT CGACACGTCC
ATCTATGACC GAGTCGAAAT CGTTCGCGGT GCCACCGGGC TGATGACCGG GGCCGGCGAC
CCGTCGGGCA GCGTTAACCT GATCCGCAAG CGTCCGACGG CAAACTTCCA AGGTGCTGTC
AGCGCCGGAG CGGGGTCTTG GGACACCTAT CGAAGCGAAG TCGATCTATC CGGCCCACTG
ACCGCCGACG CCCGCCTGCG TGGCCGTGCC GTGGTGGCTT ACCAGCAGGG CAACAGTTAC
ATCGACCATT ACCAGCAGGA AAAACAGACC TATTACGGCA TCCTCGAAGC GGACCTCAGC
GACAGCACCC TGCTGACGGT AGGCTTCGAC TACCAGAAAA ACGACCCGCG TGGGGTTTCG
TTCGCCAGCT TCCCGCTGTT CTACGATGAC GGCGAGCAGA CCGATTTCTC GCGCTCGACC
AATGCGGCCT CGCGCTGGAG CTATCGCCAG CAGAACACCC TCAATACCTT CGCCACCCTG
GAACAAGACC TGGTCAACGA CTGGAAGCTG AAGGTGTCGG TAAACAACAT GTACAGCACC
CGTGACTACT CGCTGGCGTC CGCCAGTGGC GGTTTCCCCA ACAAGCAAAC CGGGGAGGGT
GCTTACCTGT ATGGCGGCGA CGGCTATGGC TCGCAACGTC AGTTGGGTAT CGATGCCATC
GTTCAGGGGC CGTTCCAGTT GCTGGGGCGC CAGCACGAGC TGTTGGCCGG TGTGAGCGGC
TCGGCGTTTC ACGACTACAG CAACCCGGAC GACGATGACC TGGAAATGAA GCCGGTCAAT
ATCTACGACT GGGACAACAA CACCGACCGC CCGGTCTCGG TGGGCAAGCT GATGAACGAT
GACACCACCA TCCGCCAGGA TGCTGCGTAC ATGGTGGCGC GTTTCAAGCC GACCGACGAC
CTGTCACTGA TCTTGGGCGC CCGTGTCGGC GATTACAGCT ACAAGAAAAA GGCCATCTAC
AACGCGCCCT ACACCCGTTC GACCAACCAT CAGGCCACCC GCGAATCCGG TTTTGTCACG
CCCTACGCGG GCGTGGTCTA CGACCTGAAT GCACAGCATT CGGTGTATGC CAGCTACACC
AAGATCTACA AGCCACAGTC GCTACGCGAC AGCAGTGGCG CCACGCTTGA GCCGCGCGAA
GGCGACAACT ATGAAATCGG CCTGAAAAGC GAGCTGCTGG ACGGGCGTGT CAATACAGCC
ATTGCCCTTT ACCAGATCAA GCAGGACAAC CTGGGTGTGC TCAGTGGCGG CTTCGTCGAA
GGGACCGATC GCGAGCGCGC TTACAAGGCG GTGTCCGGTG CCACCACGCG GGGTATCGAC
CTGGAAGTCT TCGGCGAGAT CACGCCCGGC TGGAACGTCA CTGCAAGTTA CAGCCACAGC
CTGACCAAGG ATGCGGACCA TGAGCGTATC AACACCATCG CCCCGGCGAA CATGGTCAAA
CTGTGGACCA CCTACCGCCT GCCGGGCGAA CTTAATCGCC TGACCGTGGG TGGCGGCATG
AACTGGCAAA GCGGCCTGAG CCTGACTGAT GCGCCGTGGC AGATTGGCCA TACGGTCAAG
GCGACCCAGG GCCAATACGC GGTGTTCAAC CTGATGGCGC GTTATGACGT CACCCAGCAC
CTGACGGCGA CCGTTAACGT GAACAACCTG TTCGACAAGA AATACCTCAG CGCGCTGGAC
CCGACCTTTT ACACCGGGTT CTATGGCGAG CCGCGCAATG TGATGCTCAG TACCAAGTAC
AGTTTCTGA
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| Protein sequence | MLVRPSLLAL SLTGSLLVVT PAWAIAYDIP AGSLAASLSQ FAAASGVMIT FSSQDTAGLR
SPGLQGDYEL EQGFARLLQG SGLRVVQAGE KRYVLARADS SGAMELGATN IDAAGLGAVT
EGTGSYTTGS SNSSTKLALS LRETPQTVSV MTRQRIEDQQ LNTLSDVLKQ TPGLNVQNID
SERVNIYSRG YSIDNYQFDG IPTTLIVQTS ASPQSMIDTS IYDRVEIVRG ATGLMTGAGD
PSGSVNLIRK RPTANFQGAV SAGAGSWDTY RSEVDLSGPL TADARLRGRA VVAYQQGNSY
IDHYQQEKQT YYGILEADLS DSTLLTVGFD YQKNDPRGVS FASFPLFYDD GEQTDFSRST
NAASRWSYRQ QNTLNTFATL EQDLVNDWKL KVSVNNMYST RDYSLASASG GFPNKQTGEG
AYLYGGDGYG SQRQLGIDAI VQGPFQLLGR QHELLAGVSG SAFHDYSNPD DDDLEMKPVN
IYDWDNNTDR PVSVGKLMND DTTIRQDAAY MVARFKPTDD LSLILGARVG DYSYKKKAIY
NAPYTRSTNH QATRESGFVT PYAGVVYDLN AQHSVYASYT KIYKPQSLRD SSGATLEPRE
GDNYEIGLKS ELLDGRVNTA IALYQIKQDN LGVLSGGFVE GTDRERAYKA VSGATTRGID
LEVFGEITPG WNVTASYSHS LTKDADHERI NTIAPANMVK LWTTYRLPGE LNRLTVGGGM
NWQSGLSLTD APWQIGHTVK ATQGQYAVFN LMARYDVTQH LTATVNVNNL FDKKYLSALD
PTFYTGFYGE PRNVMLSTKY SF
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