Gene PputGB1_3279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3279 
Symbol 
ID5871064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3677512 
End bp3677958 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content62% 
IMG OID641548395 
ProductMarR family transcriptional regulator 
Protein accessionYP_001669507 
Protein GI167034276 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.861844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.752327 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGACC TTAAAAACCC TGCCTCCCAG CAACAGGCGA TGGAGGCCTT TTTCTTCGGC 
TACCAGGCGT TCACCGCCAA GGCCGACGAA ATGCTCGAAC GCCGTGGCCT GGGCCGGGTG
CATCAACGCA TCGTGTTCTT CATCGCGCGC TATCCGAACC TGAGCGTGAA GGACTTGCTG
GCCTTGCTTG GGGTCAGCAA GCAAGCGCTG AACATGCCAA TGCGCCAGTT GACGGAAATG
CGCCTGGTGG AGAGTGCGGC CTGCGAGGCC GACAAACGCA AGCGCTTGCT GGCCCTGACC
GAGGAAGGCG CGCGCCTGGA GCAGATGCTG CGGCGCGAGC AGGTGAAGTT GCTGGAGCGG
GTGTTCGCAG AAGCCGGGGA AGACGCTGTG AATGGCTGGC TGGCAGTGAA CACGGCGCTG
GGCAAAAGCC AGATGGCTAC TGCCTGA
 
Protein sequence
MIDLKNPASQ QQAMEAFFFG YQAFTAKADE MLERRGLGRV HQRIVFFIAR YPNLSVKDLL 
ALLGVSKQAL NMPMRQLTEM RLVESAACEA DKRKRLLALT EEGARLEQML RREQVKLLER
VFAEAGEDAV NGWLAVNTAL GKSQMATA