| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3271 |
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| Symbol | |
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| ID | 5871056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3668976 |
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| End bp | 3669983 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641548387 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_001669499 |
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| Protein GI | 167034268 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.327803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATTG ATCTTCCGCT GATCTGGTTC CTGATCATCG GCTTTGGCGT GATGATGTAC
GTCATCATGG ACGGTTTCGA CCTGGGTATC GGCATCCTGT TCCCGTTCAT CACCGACCGC
GAGCAGCGCG ACACCATGGT CAACACCGTG GCGCCGGTGT GGGACGGCAA CGAAACCTGG
CTGGTGCTGG GTGGGGCTGG GTTGATGGCC GCCTTCCCCA AGGTGTATGC CATCCTGCTC
AGTGCGCTGT ACATTCCGGC GCTGGGCCTG CTGGCCGGGT TGATCTGGCG TGGGGTGTCG
TTCGAGTTTC GCTTCAAGGC CGATGAGGCG CACAAACCGT TCTGGGACCG GGCCTTCATG
GCCGGGTCGT ACGCTGCGGC GTTCTTCCAG GGGGTGATGC TGGGGGCGTT CATCGAGGGG
CACTCGATCG TCGACGGGGT GGCCACCAAT GGCCTGATGA GCTGGCTTAC GCCGTTCAAC
GTGTTCTGCG GGGTTGGGGT GGTGGTGGCC TATGCGCTGC TGGGCGCCAC CTGGCTGGTA
CTGAAGACCG AAGGCCGGCT ACAGGCAAGC ATCATTCGAG CCTGCACACC GATCACCCTG
GCGACGGTGG CGGCCATGCT GATTGTCAGC ATCTGGACCC CGCTGACGCA TCCGGCGATC
TTCGAACGTT GGTTCAGCCT GCCCAACTTC TGGTTCTTCC TGCCGGTACC GGTGCTGGTG
CTGGTGGCCA CCTGGGCGAT TCTCAAATCG CTGCGTGGCG CACCCCATGC CGGGCCTTTC
GTCTGGTCGC TGCTGCTGGT GTTCCTCGGT TTCACCGGGT TGGTGATCAG CATCTGGCCT
TACGTACTCC CGCCCAGCCT GACCATCTGG GAGGCAGCGG CGCCACCGCA GAGCCTGGGC
TTCGCCCTGG TCGGGGCGTT GCTGATCATC CCGTTCATCC TGGGGTATTC GGCCTGGTCG
TATTATGTGT TCCGCGGCAA GGTGAAGGAC GGCGAGGCCT ATCATTGA
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| Protein sequence | MGIDLPLIWF LIIGFGVMMY VIMDGFDLGI GILFPFITDR EQRDTMVNTV APVWDGNETW
LVLGGAGLMA AFPKVYAILL SALYIPALGL LAGLIWRGVS FEFRFKADEA HKPFWDRAFM
AGSYAAAFFQ GVMLGAFIEG HSIVDGVATN GLMSWLTPFN VFCGVGVVVA YALLGATWLV
LKTEGRLQAS IIRACTPITL ATVAAMLIVS IWTPLTHPAI FERWFSLPNF WFFLPVPVLV
LVATWAILKS LRGAPHAGPF VWSLLLVFLG FTGLVISIWP YVLPPSLTIW EAAAPPQSLG
FALVGALLII PFILGYSAWS YYVFRGKVKD GEAYH
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