| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3260 |
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| Symbol | |
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| ID | 5871045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3658001 |
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| End bp | 3658867 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548376 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001669488 |
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| Protein GI | 167034257 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03339] aminoethylphosphonate catabolism associated LysR family transcriptional regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.670628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.111197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCAGT ACCACAAGTG GTTGCGCTCA TTTCATGCGG TGGCGCGCAC CGGCAGTTTC
ACCCAGGCCG CCGAGTTGCT GAGCATCGGC CAGCCAACCA TCAGCGAGCA GGTCAGTGGC
CTGGAAAAGC GCTTTTGCGT GGAACTGTTC CACCGTCGAG GGCGCTTTAT CGAGCTCAGC
CCGGCAGGCC GCCAGCTGTA CGAAATTACC CAGGGCCTGT TCGGCCAGGA GGACGAAGCG
CTGCAACTGT TGCAGAGCTT CCAGCAGCGC AAGCAAGGCA TGTTGCGCAT CGGGGCGGTG
TCGCCGCCGA TTGCCATGAG CCTGACCTAC GAGCTGATGC AGCGCTACCC GCAGATCGAG
CTGGAAACCT CGTTCAGCAG CGAAGCCGGC ACGCTGGAGC GGCTGTACAA CTTCGACATA
GACCTGGCCA TCCTCGCCCT GTCGGAGTTC GACCAGCGCC TGAGCACGCG GCTTTACCGC
ACTTGCCCGA TTCTGGCGGT GGTGCGCGAC GACCACCCGT GGGCGCGACA GGCGAGTGTC
AGCGTCAAGG ACATTGCCGG CCAGCGGGTG GTATTGCGCG AAGCGGCATC GCGCACCCGG
CAACTGGTCG AAGAAGGCTG CCGCCAGCAT GGCGTGACAC TGGATTGCGC GATGCAGTTG
AACAGCCGCG AGGCCATCGT GCATGCGGTG GTGCATGGTA TTGGCGTGGG CTTTGTCTCG
GCAGTGGAGT ACGCCGACCG CCCCGGCACG CGCTCCATCG CCTTTGCCGA AGACCCGTTC
CACATCCATT ACTACCTGTG CTGCCTGGGC ATCCGCCGTA ACCGGGCGAT CATCGCCGAG
CTGTTCGACG CGCTCAACGC GCACTGA
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| Protein sequence | MYQYHKWLRS FHAVARTGSF TQAAELLSIG QPTISEQVSG LEKRFCVELF HRRGRFIELS
PAGRQLYEIT QGLFGQEDEA LQLLQSFQQR KQGMLRIGAV SPPIAMSLTY ELMQRYPQIE
LETSFSSEAG TLERLYNFDI DLAILALSEF DQRLSTRLYR TCPILAVVRD DHPWARQASV
SVKDIAGQRV VLREAASRTR QLVEEGCRQH GVTLDCAMQL NSREAIVHAV VHGIGVGFVS
AVEYADRPGT RSIAFAEDPF HIHYYLCCLG IRRNRAIIAE LFDALNAH
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