| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3254 |
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| Symbol | |
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| ID | 5871039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3651823 |
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| End bp | 3652689 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548370 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001669482 |
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| Protein GI | 167034251 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03339] aminoethylphosphonate catabolism associated LysR family transcriptional regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.819694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.147179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCG CCCGCTTGCG TACGTTCCTT GCCGTGGCCC GGCATGCCAG CTTCAGTGCC
GGGGCCAGGG CCATTGGCCT CAGCCAGCCG ACCGCCACCA ACCAGGTCCA GGGGCTGGAG
CGCGAATTCA ACGTCGAACT GTTCCACCGC CGTGGCCGGC GCATCGAGTT GACCGCCGTT
GGCCGCGCCT TGTTGCCGAT TGCACAGCGG ATGTGGATGC TCGAAGCCGA GGCCACCAGC
CTGCTGCGCG ACAGTGGCCA GCTTAACCGG GGGGAGCTGA AGATCGGTGC GGTGGGGCCG
TTCCATGTGA TCGAGATGGT CGACCGCTAC CGGCAGGCGT ATCCACAGAT CGACGTGTCG
ATTCGCGTGG GCAACTCGGC GTCGGTGCTG GCCGATCTTC AGGGCTACGT GACCGATATC
GGCGTGTTGG CAGGGCTGCA TGATGACCCG GCGTTTGTCG CACAACGCTA TGCCAGGCAC
GCGGTGATCC TGTTTGTCCG CGCCGATCAC CCGTTCGCCC GTCATGACCA GGTCCTGCTG
CAGGCGTTGC AGGGGCAGCC GTTGCTGCGC CGTGAGCAAG GTTCAACTAC GCGGCTGGCG
TTGGACAATG CACTGGATGC TGCCCAGGTA ACACCGCGTA TCGTCATGGA GATCGGCAGC
CGCGAGGCGC TGCGCGAGGC GGTGATTCGT GGCATGGGTA TTGGTGCGGT GTCCGAGGCA
GAATACATCG CCGACCCCCG CTTGAAAGTG ATCCGCATCG CACAGGACTC GGTGTATACC
GAAACCTACC TGTACTACCT GGCCGAGCGA CAGGGCAGCC AGGTCATTGC GTCGTTTCAG
CGCACGCTTC AAGGCTGGCA CGGCTGA
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| Protein sequence | MSTARLRTFL AVARHASFSA GARAIGLSQP TATNQVQGLE REFNVELFHR RGRRIELTAV
GRALLPIAQR MWMLEAEATS LLRDSGQLNR GELKIGAVGP FHVIEMVDRY RQAYPQIDVS
IRVGNSASVL ADLQGYVTDI GVLAGLHDDP AFVAQRYARH AVILFVRADH PFARHDQVLL
QALQGQPLLR REQGSTTRLA LDNALDAAQV TPRIVMEIGS REALREAVIR GMGIGAVSEA
EYIADPRLKV IRIAQDSVYT ETYLYYLAER QGSQVIASFQ RTLQGWHG
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