Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3242 |
Symbol | |
ID | 5871027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 3633171 |
End bp | 3633947 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641548358 |
Product | IclR family transcriptional regulator |
Protein accession | YP_001669470 |
Protein GI | 167034239 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.524532 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGTA GTCAGATCGA ACGCGCCTTC AGTCTTGTAG AAAGCCTTGC CGGTGAGCCC CAGGGGCTAC CGCTGCAAAC CCTGGCCGAG CGCCTGGACA TTCCCAAAAG CGCTGCCCAC CGCATGCTCA CCGAGCTGGT GCGGCTGGGC TATGTGCGAC AAAACCGGGA AAGCAGCCGT TATCAGCTAT CGGCCAAGCT GGTCGCGCAG GGCTTTCGTT ACCTGGCCAG CAGCGGTGCC GACATCATCC AGCCGATTCT CGACCGCCTG GCCCAGGACA GCGGTGAACT GGTACGCCTG GGTGTGATCG AGGGCGTCCG GCAAACCTGG ATCGCCAAGT CCCAGGGCGC CCGCTCCGGG CTGCGCTACG ACCCGGACAT GGGCCGCGAT GCGCCGCTGT TCTATACCGC CTCCGGGCAT GCCTGGCTGG CCAGCCTGAA CGATGAGCAG GCGCTGCAGA TGGTGTTGCG CCAAGGCATT GCCGACCCCG CTCAGTTCGG CCCGAATGCA CCGCGCTCCA CCGATGAGCT GCTCGCCTAC CTGCACCGCG CCCGCGAGCG TGGCTACGCC TGGGTCGAGG AAACCTCCGC CATTGGCACG TCGGCCCTCG CCGCAGTGGT GCGCCGCCCG CAAAGTGACG AGGTCATCGG CGTGCTGAGC ATCGCCGGGC CCAGCGCGCG CCTGGCACAA AGCCGCCTGC CCGAGCTGGC ACCGCTGCTG CTGGCGGCGG CGGACGAACT GTCGGCTGCC AGCCGCGCCA GCGAGTTGTT CGCTTGA
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Protein sequence | MAGSQIERAF SLVESLAGEP QGLPLQTLAE RLDIPKSAAH RMLTELVRLG YVRQNRESSR YQLSAKLVAQ GFRYLASSGA DIIQPILDRL AQDSGELVRL GVIEGVRQTW IAKSQGARSG LRYDPDMGRD APLFYTASGH AWLASLNDEQ ALQMVLRQGI ADPAQFGPNA PRSTDELLAY LHRARERGYA WVEETSAIGT SALAAVVRRP QSDEVIGVLS IAGPSARLAQ SRLPELAPLL LAAADELSAA SRASELFA
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