Gene PputGB1_3242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3242 
Symbol 
ID5871027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3633171 
End bp3633947 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content67% 
IMG OID641548358 
ProductIclR family transcriptional regulator 
Protein accessionYP_001669470 
Protein GI167034239 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.524532 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGTA GTCAGATCGA ACGCGCCTTC AGTCTTGTAG AAAGCCTTGC CGGTGAGCCC 
CAGGGGCTAC CGCTGCAAAC CCTGGCCGAG CGCCTGGACA TTCCCAAAAG CGCTGCCCAC
CGCATGCTCA CCGAGCTGGT GCGGCTGGGC TATGTGCGAC AAAACCGGGA AAGCAGCCGT
TATCAGCTAT CGGCCAAGCT GGTCGCGCAG GGCTTTCGTT ACCTGGCCAG CAGCGGTGCC
GACATCATCC AGCCGATTCT CGACCGCCTG GCCCAGGACA GCGGTGAACT GGTACGCCTG
GGTGTGATCG AGGGCGTCCG GCAAACCTGG ATCGCCAAGT CCCAGGGCGC CCGCTCCGGG
CTGCGCTACG ACCCGGACAT GGGCCGCGAT GCGCCGCTGT TCTATACCGC CTCCGGGCAT
GCCTGGCTGG CCAGCCTGAA CGATGAGCAG GCGCTGCAGA TGGTGTTGCG CCAAGGCATT
GCCGACCCCG CTCAGTTCGG CCCGAATGCA CCGCGCTCCA CCGATGAGCT GCTCGCCTAC
CTGCACCGCG CCCGCGAGCG TGGCTACGCC TGGGTCGAGG AAACCTCCGC CATTGGCACG
TCGGCCCTCG CCGCAGTGGT GCGCCGCCCG CAAAGTGACG AGGTCATCGG CGTGCTGAGC
ATCGCCGGGC CCAGCGCGCG CCTGGCACAA AGCCGCCTGC CCGAGCTGGC ACCGCTGCTG
CTGGCGGCGG CGGACGAACT GTCGGCTGCC AGCCGCGCCA GCGAGTTGTT CGCTTGA
 
Protein sequence
MAGSQIERAF SLVESLAGEP QGLPLQTLAE RLDIPKSAAH RMLTELVRLG YVRQNRESSR 
YQLSAKLVAQ GFRYLASSGA DIIQPILDRL AQDSGELVRL GVIEGVRQTW IAKSQGARSG
LRYDPDMGRD APLFYTASGH AWLASLNDEQ ALQMVLRQGI ADPAQFGPNA PRSTDELLAY
LHRARERGYA WVEETSAIGT SALAAVVRRP QSDEVIGVLS IAGPSARLAQ SRLPELAPLL
LAAADELSAA SRASELFA