| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3240 |
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| Symbol | |
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| ID | 5871025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3631133 |
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| End bp | 3631948 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641548356 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001669468 |
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| Protein GI | 167034237 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.308635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATC GGATTTTCTC CCTCGCGGCC CTGACGGTAC TCGAGCTGTC CCCACCGGAC
ATGGTCGAGG CTGCCGCCCG CGCGGGTTAC AGCCACGTTG GCCTACGCCT GGTGCCCGCT
ACCGAACACG AGCAGCACTT CCCGTTGGTG GCCGATGCCG ACCTGCGTCG GCAGACCCAG
GCGCGCCTGC GCGACACCGG CATCAAGGTG CTCGACCTGG AGATTCTGCG CCTCAAGCCG
GAAACCTGCG TCGCCGATTT CGAACCGATC CTGGCGGTGG GCGCCGAGTT GGGGGGCACC
GAACTGCTGG TGGCTGGCAA CGACCCGGAC GAAGCGCGGC TGACCGAACG CTTTGCCGCT
TTGTGCGAGC TGGCGGCGCG CTACGGCATC TACCCGCACC TGGAGTTCAT GCCCTGGACC
GACGTGCGCG ACCTGCGCCA GGCCATGCGA GTGGTGGCCA ACGCCGACCA CGCCAATGGC
TGCGTGCTGG TGGATGCCTT CCACTTCAAC CGATCCCACT CATCGTTGGA CCACCTGGCG
CAGTTGGCTC CGCAGCGCAT GCGCTATGCC CAGCTGTGTG ACGTGGCCGG CCCAGTACCG
GCCGACATGG ACGAGATTCT GCGCCAGGCG CGTAACGAGC GACGCTTCCC CGGTGATGGC
GATGCCGACC TGGTCAGCCT GCTGCGCGGC TTGCCGCCAA CCGTGCCGCT GAGCCTGGAA
ATACCCACAC GGCAGTTGCA GGAGCAGGGC ATCAGCGGCG AACAGCGCGC GCGCATGGCG
CTGGAGAAAG CCCTGGCGGT GTTGGCCAAG GTCTGA
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| Protein sequence | MTDRIFSLAA LTVLELSPPD MVEAAARAGY SHVGLRLVPA TEHEQHFPLV ADADLRRQTQ
ARLRDTGIKV LDLEILRLKP ETCVADFEPI LAVGAELGGT ELLVAGNDPD EARLTERFAA
LCELAARYGI YPHLEFMPWT DVRDLRQAMR VVANADHANG CVLVDAFHFN RSHSSLDHLA
QLAPQRMRYA QLCDVAGPVP ADMDEILRQA RNERRFPGDG DADLVSLLRG LPPTVPLSLE
IPTRQLQEQG ISGEQRARMA LEKALAVLAK V
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