Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3205 |
Symbol | |
ID | 5870990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3589917 |
End bp | 3590936 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641548321 |
Product | ABC transporter related |
Protein accession | YP_001669433 |
Protein GI | 167034202 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTTC TGTTGATCGA CAAACTCTGC AAGCGCTATG GCGCCACGGA GGCAGTGGCC AGCTCGTCAC TGTCCATCGA AAAAGGCGAG TTCGTCTCCC TGCTCGGCCC TTCCGGCTGT GGCAAGACCA CCACCCTGCA GATGATCGCC GGCTTCGTCG AAGTCACCAG CGGGCGCATC GTGCTCGATG GCCGTGACAT CACCCATGCC AAACCGGCCA GCCGCGGCCT GGGGGTGGTG TTTCAGAGCT ACGCGCTGTT CCCGCACATG ACCGTGCGCG ACAACGTCGC CTTTGGCCTG CGCATGCGCA AGGTGGCCAA TGCCGACATC GCCCGCCGCG TCGACCAGGC CCTGGCGCTG GTACGCCTGG ACAAACATGC CGAACGCTAC CCACGGGAAC TGTCCGGCGG CCAGCGTCAG CGTGTAGCCC TGGCCCGCGC GCTGGTGATC GAACCGCCGG TGCTGCTGCT GGACGAGCCG CTGTCCAACC TGGACGCGCA CCTGCGTGAA GAAATGCAGT TCGAGATTTG TCGCATTCAG CACGAGGTGG GCATCACCAC CTTGATGGTC ACCCACGACC AGGCCGAAGC CTTGTCGATC AGTGATCGGG TGGTGGTGAT GGAAGCCGGG CGTATCACCC AGGTCGATGA CCCTTACCGG CTTTACGAAC ACCCAGGCAC GCCGTTCATT TCCGACTTCG TCGGCAAGGC CAACCGCCTG CGAGGCGTAA CCGGCCCCGG CGGGCAACCG CAGGCTGCGG CCCAAGGCCC GCTGACCCTC AGCCTGCGCC CGGAAAAGAT CAACCTTGGC GCCGCCGGCA GCGGCAAGCT GGCGGGCCGC ATCAACTGCC GCTACTTCCT CGGCAGCCAG TGGCTGTACC GCGTCGACAC GGCCTTGGGC AACCTGGCCG TGGTTCGTGC CAACGATGGC AACGCACCGC TGGAGGAAGG CACGCACGTT GGCCTGGACT GGAACGATGC CCTGCTGCGG GTACTGAACG CGGCTGAGGT GGCGGCATGA
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Protein sequence | MTFLLIDKLC KRYGATEAVA SSSLSIEKGE FVSLLGPSGC GKTTTLQMIA GFVEVTSGRI VLDGRDITHA KPASRGLGVV FQSYALFPHM TVRDNVAFGL RMRKVANADI ARRVDQALAL VRLDKHAERY PRELSGGQRQ RVALARALVI EPPVLLLDEP LSNLDAHLRE EMQFEICRIQ HEVGITTLMV THDQAEALSI SDRVVVMEAG RITQVDDPYR LYEHPGTPFI SDFVGKANRL RGVTGPGGQP QAAAQGPLTL SLRPEKINLG AAGSGKLAGR INCRYFLGSQ WLYRVDTALG NLAVVRANDG NAPLEEGTHV GLDWNDALLR VLNAAEVAA
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