Gene PputGB1_3205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3205 
Symbol 
ID5870990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3589917 
End bp3590936 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content65% 
IMG OID641548321 
ProductABC transporter related 
Protein accessionYP_001669433 
Protein GI167034202 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTTC TGTTGATCGA CAAACTCTGC AAGCGCTATG GCGCCACGGA GGCAGTGGCC 
AGCTCGTCAC TGTCCATCGA AAAAGGCGAG TTCGTCTCCC TGCTCGGCCC TTCCGGCTGT
GGCAAGACCA CCACCCTGCA GATGATCGCC GGCTTCGTCG AAGTCACCAG CGGGCGCATC
GTGCTCGATG GCCGTGACAT CACCCATGCC AAACCGGCCA GCCGCGGCCT GGGGGTGGTG
TTTCAGAGCT ACGCGCTGTT CCCGCACATG ACCGTGCGCG ACAACGTCGC CTTTGGCCTG
CGCATGCGCA AGGTGGCCAA TGCCGACATC GCCCGCCGCG TCGACCAGGC CCTGGCGCTG
GTACGCCTGG ACAAACATGC CGAACGCTAC CCACGGGAAC TGTCCGGCGG CCAGCGTCAG
CGTGTAGCCC TGGCCCGCGC GCTGGTGATC GAACCGCCGG TGCTGCTGCT GGACGAGCCG
CTGTCCAACC TGGACGCGCA CCTGCGTGAA GAAATGCAGT TCGAGATTTG TCGCATTCAG
CACGAGGTGG GCATCACCAC CTTGATGGTC ACCCACGACC AGGCCGAAGC CTTGTCGATC
AGTGATCGGG TGGTGGTGAT GGAAGCCGGG CGTATCACCC AGGTCGATGA CCCTTACCGG
CTTTACGAAC ACCCAGGCAC GCCGTTCATT TCCGACTTCG TCGGCAAGGC CAACCGCCTG
CGAGGCGTAA CCGGCCCCGG CGGGCAACCG CAGGCTGCGG CCCAAGGCCC GCTGACCCTC
AGCCTGCGCC CGGAAAAGAT CAACCTTGGC GCCGCCGGCA GCGGCAAGCT GGCGGGCCGC
ATCAACTGCC GCTACTTCCT CGGCAGCCAG TGGCTGTACC GCGTCGACAC GGCCTTGGGC
AACCTGGCCG TGGTTCGTGC CAACGATGGC AACGCACCGC TGGAGGAAGG CACGCACGTT
GGCCTGGACT GGAACGATGC CCTGCTGCGG GTACTGAACG CGGCTGAGGT GGCGGCATGA
 
Protein sequence
MTFLLIDKLC KRYGATEAVA SSSLSIEKGE FVSLLGPSGC GKTTTLQMIA GFVEVTSGRI 
VLDGRDITHA KPASRGLGVV FQSYALFPHM TVRDNVAFGL RMRKVANADI ARRVDQALAL
VRLDKHAERY PRELSGGQRQ RVALARALVI EPPVLLLDEP LSNLDAHLRE EMQFEICRIQ
HEVGITTLMV THDQAEALSI SDRVVVMEAG RITQVDDPYR LYEHPGTPFI SDFVGKANRL
RGVTGPGGQP QAAAQGPLTL SLRPEKINLG AAGSGKLAGR INCRYFLGSQ WLYRVDTALG
NLAVVRANDG NAPLEEGTHV GLDWNDALLR VLNAAEVAA