| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3193 |
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| Symbol | |
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| ID | 5870978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3571651 |
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| End bp | 3572520 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548309 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_001669421 |
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| Protein GI | 167034190 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAATT TCCGTGGTAT CTGGATCGCC CTCGTCACGC CAATGCGCGA CAACGAAATC
GATTTCCCTG GCCTGGAGCG GTTGGTGAAG AAGCTGCTCG AAGACGGCGT GGCCGGTTTT
GTGGTGTGCG GTACCACGGG GGAGGCGGCG GCGTTGTCCA AGGCCGAGCA ACTGGCCGTG
CTGGATGCCG TGTTGGCCTG GGTTGAGCCG GGTAGGGTGG TGATGGGCCT GTCGGGTTAC
AACCTGCGCG AGTTGCTGGG CTTGCAGGCT GAAATCCAAC AGCGCGACAT TGGCGGGCTG
CTGGTCCCCG CACCTTGCTA CATTCGCCCA TCGCAGGCCG GCATCGAAGC CTTCTTCGCC
ACCGTGGCCG ATGCCGCCCG CGTGCCAGTG ATCGTGTACG ACATTCCTTA TCGCACCGGC
GTGCGCATCG AGCGTGAAAC CCTGCGCCGC ATCGTGCGCC ACCCGCGTAT TGCGGCCGTG
AAGGACTGCA GTGGTGACAG CGAGACCACC ATGGCCCTGA TCGAGGACGG CCACGCCCAG
GTGCTGGCCG GTGAAGACCT GCAGATTTTC AACAACCTGT GCCTGGGCGG TGCCGGGGCC
ATTTCAGCCT CCGCGCATGT GCGCGCCGAC CTGTATGTGC GCATGTTGCA GCAGGTCGAC
CGCGGCAATT GGGCGGCTGC GCGTGGCACG TTCTACCAGT TGCTGCCGTG GATCAAGGTG
GCCTTTGCCG AGCCGAACCC GGCCGTGGTG AAGGCGGCGC TGCAGATGCA GGGGCTGACG
ACCGACGAAC TGCGTGAGCC AATGCAATCA TGCAGCCAAG CCATACGCGA CAAGCTCGCA
GGTGTCCTGG GCCTGTCCGC TGCCTTGTAG
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| Protein sequence | MSNFRGIWIA LVTPMRDNEI DFPGLERLVK KLLEDGVAGF VVCGTTGEAA ALSKAEQLAV
LDAVLAWVEP GRVVMGLSGY NLRELLGLQA EIQQRDIGGL LVPAPCYIRP SQAGIEAFFA
TVADAARVPV IVYDIPYRTG VRIERETLRR IVRHPRIAAV KDCSGDSETT MALIEDGHAQ
VLAGEDLQIF NNLCLGGAGA ISASAHVRAD LYVRMLQQVD RGNWAAARGT FYQLLPWIKV
AFAEPNPAVV KAALQMQGLT TDELREPMQS CSQAIRDKLA GVLGLSAAL
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