| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3188 |
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| Symbol | |
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| ID | 5870973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3564651 |
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| End bp | 3566417 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641548304 |
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| Product | ferredoxin |
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| Protein accession | YP_001669416 |
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| Protein GI | 167034185 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0006] Xaa-Pro aminopeptidase
[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
[COG0633] Ferredoxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTATC CAAAACTGGA GGTTCTGCTG GTCCTGGACT ATAGCAACAA TCGAACCTCC
AATTGCCCCG AGGTGTTCAT GCAAAGCCGT CACGTCATCG AATTGTCGCC CTCGGGCAAA
ACCTTCGACG CCAGCCACGA ACTGCTGCTC GATGCCATGC TCGCCAGCGG GCTGCCGGTA
CCGTTCTCGT GCCGCCGCGG CGCCTGCGGC TCGTGCAAGG TCAAGGTAGT GTCGGGGCAG
TATCAGGATA AACAGCGGGA TGCGGATACA CCGGCCCCCT CCTATCCCTT GGCTGCAGAC
GAAATGCTGT TGTGCCAGAG CCATGCCTGC AGCGACATGC GCCTGGAAAT TCCGGGCTGG
TCGCTGGACA CCCCAACCCT GGAAACCCAC GCTCAGGTTG TTGGCCAGCG CGCGCTAAGC
AACGATATCG TCGAACTGGT GCTGCAGCCT GCTCAGCCGC TGGACGTCCG GGCCGGCCAG
TACGTGCGGT TCCGGCTGGA CAACGGCGAC AGCCGCTGTT TCTCCATTGC CAACCTGCCT
GCCCAGCAGC AAGGGCAGTT GGTGTTTCAC ATCCGCAAGG TCAGCGGTGG CCTGTTCACC
GAAGGTCTGC TGCCCACCCT GCAAGCAGGT GCTTCGGTAA AGCTCGAAGG CCCGCTGGGC
GCCTGTACTT GGCAGCACGA TGAGCAACGC CCGCTGGTGC TGTTGGCCAC CGGCACAGGC
TACGCCGGCA TCAAGCCCTT GTTGCTGACT GCCCTGGCTC GCGACGCCGA GGTGGCCCTG
TACTGGGGTG GCTCATCGAC GGCCGATTTC TACGACCACG CGTTTCTCGA CCAGGCCAGT
GGGGCGCACC CACACTTTCG CTGGTACCCG GTACTCGCGG GCCAGGCACG CATCCAGCAG
GTCGCGCTCG GCCAGCCCCA CCACTGGGAA GAAACCCAGG TCTATGCCTG CGGCAATCCC
GCGATGATCA GCCAGGCGCG CGAACAATGC GTTGCGGCGG GCGTGCTACC CCATCGCTTT
GTCGCCGAGG CCTTTGTCGC CAGCGGCGCG GCGGCCACCC AGGCCTCAGC AGCCAGCACG
CTGCACCCTG AACTGGAAAA GGTCGGCCCA CGCTACTCGC TGGACGGCAT GCTCGCGGCC
CGCGAGCAGT CGGTACGGTC CGTGGCCGCT ATTGCCAGCC AACTGCAAGT CGGCATGACC
ACCGCCCAGG CGCTGGAGAT GGCCGCGCAA ACCCTGCAGG CAATGGGCGC GTCGCACACC
TGGCACCCCA CCTACATCCG TTTTGGCGAC GATACCGTAC GCACACCCCG GCAAGGCATT
GATCTGCAGC GCGTATTACG TAGCACAGAC ATTGTCGTGG TCGACGTGGG CCCGGTGTGG
GATGGCTATG AGGGCGACTA TGGCGACACC TTCGTGTTTG GCCAGCACCC ACTGCACCAC
GCCTGCGTGA AGGCACTGCA TGAAGTGTTC GACGAAACCC GCCAGGCCTG GGGGCGTGGG
CTGACCGGTC GCGAGCTTTA TGACTTCGCA GAGCGCAGTG CCCAGGCCAA AGGCTGGCAG
CTGGAGCGCA ACCTGGCCGG GCACCGCATC GCAGACTTCC CGCATGTGTT GTATGGCCAG
GACAAGCTGG CCGAGGTGGG AATCGTGCCC AGCGAAGTGG TGTGGGTATT GGAGATTCAG
TTGTGCCACC CTACCGAGCC GGTCGGGGCA TTCTTTGAAG ATATCCTGAT TGGCGACGCC
AGGTCGGCCG TGGCTACGGC TGCTTGA
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| Protein sequence | MNYPKLEVLL VLDYSNNRTS NCPEVFMQSR HVIELSPSGK TFDASHELLL DAMLASGLPV
PFSCRRGACG SCKVKVVSGQ YQDKQRDADT PAPSYPLAAD EMLLCQSHAC SDMRLEIPGW
SLDTPTLETH AQVVGQRALS NDIVELVLQP AQPLDVRAGQ YVRFRLDNGD SRCFSIANLP
AQQQGQLVFH IRKVSGGLFT EGLLPTLQAG ASVKLEGPLG ACTWQHDEQR PLVLLATGTG
YAGIKPLLLT ALARDAEVAL YWGGSSTADF YDHAFLDQAS GAHPHFRWYP VLAGQARIQQ
VALGQPHHWE ETQVYACGNP AMISQAREQC VAAGVLPHRF VAEAFVASGA AATQASAAST
LHPELEKVGP RYSLDGMLAA REQSVRSVAA IASQLQVGMT TAQALEMAAQ TLQAMGASHT
WHPTYIRFGD DTVRTPRQGI DLQRVLRSTD IVVVDVGPVW DGYEGDYGDT FVFGQHPLHH
ACVKALHEVF DETRQAWGRG LTGRELYDFA ERSAQAKGWQ LERNLAGHRI ADFPHVLYGQ
DKLAEVGIVP SEVVWVLEIQ LCHPTEPVGA FFEDILIGDA RSAVATAA
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