| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3170 |
|---|
| Symbol | |
|---|
| ID | 5870955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 3544740 |
|---|
| End bp | 3545042 |
|---|
| Gene Length | 303 bp |
|---|
| Protein Length | 100 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641548286 |
|---|
| Product | branched-chain amino acid transport |
|---|
| Protein accession | YP_001669398 |
|---|
| Protein GI | 167034167 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4541] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.142776 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGACG TTTCGACGCT GGTCACCATC CTGGGCATGG CCGTGGCCAC CTACCTGACC
CGTGCGCTGG GCTTTTTGCT GCTGCGCAAG CGCACCCTGG GGCCACAGCT GACCCAGGTG
CTGAACGCCG CGCCCGGCTG CGTGTTGATT GCCGTGATCG CTCCCAAGTT CGTTTCCGGG
CAGCCGGCCG ACCTGATTGC GCTGGGGCTC ACGGTGTACG CAGCCACACG GTTTTCGCTC
TTGCCGGTGG TGGTGTTCGC CATTGTCGTG ACCGGGGTGC TGCGGATGCT GTTGCTGGCA
TGA
|
|---|
| Protein sequence | MMDVSTLVTI LGMAVATYLT RALGFLLLRK RTLGPQLTQV LNAAPGCVLI AVIAPKFVSG
QPADLIALGL TVYAATRFSL LPVVVFAIVV TGVLRMLLLA
|
|---|
| |