| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3155 |
|---|
| Symbol | |
|---|
| ID | 5870940 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 3529784 |
|---|
| End bp | 3530926 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641548271 |
|---|
| Product | iron-containing alcohol dehydrogenase |
|---|
| Protein accession | YP_001669383 |
|---|
| Protein GI | 167034152 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTGA TCAACTACGT CACCCAGATT CAATTCGAAA GCGGCGCCAT CGCCCGCTTG
CCTGCCGAGT GCGAGCGCAT TGGTATAACC AGGCCTTTGA TCGTGACCGA CCGAGGCGTG
CGCGCTGCCG GTATTGTCGA TACGGCGTTG AACACCTTCG GCGACAGCAC CGCGCAACTG
CCGATCTATG ACGGTACGCC ACCCAACCCC AACGAGAATG CCGTGCGTGA AGCCGTGGCC
ATGTTCAAGG AGTGCGGCTG TGACGGCATC ATCGCCATTG GCGGCGGCTC GGCGATCGAC
CTGGCCAAAG GGGTGGCGGT GTGTGCCCGA CACGATGGCC CCTTGAAAAG CTTTGCGGTG
ATCGAGGGCG GCCTGGCCCG CATCACCCCG GCAACCGCGC CGGTGATTGC GGTACCGACC
ACCGCCGGCA CGGGCAGCGA GGTAGGGCGG GGCGCCATCC TGATTCTCGA TGACGGGCGC
AAGGTGGGGG TGATCTCGCC CCATGTGGTG CCCAAGGCTG CCATCTGTGA CCCGGCGTTG
ACCCTTGGCC TGCCGGCACA GCTCACGGCT GCCACTGGCA TGGATGCGAT TGCCCACTGC
CTGGAAACCT TCATGGCCCC TGTATTCAAC CCGCCTGCCG ACGGTATTGC CCTTGACGGC
CTGTGGCGCG CCTGGCGCTT CATCGAGAGC GCCACCCGCG AACCGGGCAA CCTGGACGGG
CGCATCAACA TGATGAGTGC TTCGCTGCAA GGTGCGTTGG CTTTCCAGAA GGGCCTGGGC
TGCGTGCACA GCCTTAGCCA TGCGCTGGGC GGGATCAACC CGCGCCTGCA TCACGGTACC
CTCAATGCGA TCTTCCTGCC TGCCGTCATC ACCTTCAACC GCCAGGCCGA AACGGTGCTT
GACGAGCACA AGATGCAACG CATCGCCCAG GCGATGGGGT TGGCGGACGA CAGCCAGATC
GAAGAGGCCA TCCGCAACAT GACCCGCACG CTGGGCCTAC CGACCGGGCT GGGCGAGCTG
GGCGTCAGCG AGGACCTGTT CCCGCGCATC ATCCAGGGCG CGCTGGCCGA CCACAGCCAC
CGCACCAACC CGCGCGAAGC GTCTGCCGAG GACTACCAGG GGTTGCTTGC AGCGTCCATG
TAA
|
|---|
| Protein sequence | MSLINYVTQI QFESGAIARL PAECERIGIT RPLIVTDRGV RAAGIVDTAL NTFGDSTAQL
PIYDGTPPNP NENAVREAVA MFKECGCDGI IAIGGGSAID LAKGVAVCAR HDGPLKSFAV
IEGGLARITP ATAPVIAVPT TAGTGSEVGR GAILILDDGR KVGVISPHVV PKAAICDPAL
TLGLPAQLTA ATGMDAIAHC LETFMAPVFN PPADGIALDG LWRAWRFIES ATREPGNLDG
RINMMSASLQ GALAFQKGLG CVHSLSHALG GINPRLHHGT LNAIFLPAVI TFNRQAETVL
DEHKMQRIAQ AMGLADDSQI EEAIRNMTRT LGLPTGLGEL GVSEDLFPRI IQGALADHSH
RTNPREASAE DYQGLLAASM
|
|---|
| |