| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3153 |
|---|
| Symbol | |
|---|
| ID | 5870938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 3527493 |
|---|
| End bp | 3528278 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641548269 |
|---|
| Product | hydratase/decarboxylase |
|---|
| Protein accession | YP_001669381 |
|---|
| Protein GI | 167034150 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGTT CGCTCTTCGT ACACCAACGC ACCGCAGCCC TGTTAATGCA GCACTGGCGC
AGTGGTGACC TGCTGACGGA ACTGCCCGCC AGCCTCAAGC CTGAGACGTT GAAGCAAGGT
TATGACAGCC AGGACCAGTT GTTTGCCGCT GCCGCTGGCC AGCGCGCAGG TTGGAAGCTG
GGCGTCGGCA GCCCCGCAGC CATGCGAGCA GCCAACTTGT CGCGGCCACT GATTGGCCAG
CTGGAGGCGG GGCGTTGTCA TGCGGATGGC GCACACATCC AACTGCCGGC CATTACACCG
GTGACCATCG AGTGCGAGAT CGCCTTCGTG CTTGACCGTG ATATCCCGCC ACAAGCTGGG
CGGGCCCCGG TCAGTGAGGA CATCCGCGCT ACCTGCGTCA CCTTCGAAGT GGTGCGCTCG
CGCTTTGTCG ACCGCAAGGC GGTCGGCTGG CCGAGCTTTG TGGCAGACAA CGTAGGGTTC
GAGGCGCTGG TGGTCGGCAG CAGCCTGGGC GCAGGCATCG CTGTACCGCT GTTGGCCGAC
CTGGCCGAAA CCACCGAGGT GCACGTAGAC GGTGAATTGC GGGCGCGTGG CCTGTCGGGC
GAAGCGGCGA CCGACCCGCT GGTGTCACTG GCCCACCTTT ATGCACATGC CGCCGAACGC
GGCGAGACCT TGAAGGCAGG TGATGTGGTG ACCACGGGGG CCATGTGCCA GCCCTTTGAC
CTGGATGGAA CCGGGTATCG GATAAGCGCC AGGTTCCTTG GCCAGGTGCT GTCGTTCACG
CTGTAA
|
|---|
| Protein sequence | MNSSLFVHQR TAALLMQHWR SGDLLTELPA SLKPETLKQG YDSQDQLFAA AAGQRAGWKL
GVGSPAAMRA ANLSRPLIGQ LEAGRCHADG AHIQLPAITP VTIECEIAFV LDRDIPPQAG
RAPVSEDIRA TCVTFEVVRS RFVDRKAVGW PSFVADNVGF EALVVGSSLG AGIAVPLLAD
LAETTEVHVD GELRARGLSG EAATDPLVSL AHLYAHAAER GETLKAGDVV TTGAMCQPFD
LDGTGYRISA RFLGQVLSFT L
|
|---|
| |