Gene PputGB1_3152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_3152 
Symbol 
ID5870937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp3526688 
End bp3527503 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content66% 
IMG OID641548268 
ProductXRE family transcriptional regulator 
Protein accessionYP_001669380 
Protein GI167034149 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGC ACCTGTTCCA TCGCAATAGC CCTGCCCCAC ATACTTCGGC AGGCCAGCAT 
CTACGCCACC TGCGTCGGCA GGCCAGCCTC AGCCAGCTGG ACCTGGCGCT GCTGGCGGGG
CTGTCGCAGC GCCATCTGAG CTGCGTGGAG ACCGGCCGCG CCAGGGCCAG CCCGAGCACC
TTGCATGCGC TGCTTTCGGC CCTTGGCGCG CCGTTGGAGC TGTGCAATGA AGTGTTCGTC
GCTGCCGGCT ACGCGCCCCG CTACGCGGCC TCGCCACTCG ATGCGCCCGA GTTGGCGCTG
GTGCATGCCG CCATTGAACA CATCCTGCAG GTCAACAACC CCGCACCTGC GATCGTCATC
GACAGCAACT GGGACGTCAT CGCCGCCAAT ACCAGTACCG GGCTCTTGTT GGCGATGGCC
GGCGTTACAG CACAGCCGGC CACAGGCCTC AACCTGCTGC AGACACTGCT CTGCCCCGGC
GGCCTGGGCG ATCATCTGGC CAATGCGCAA GAAATTCGCA GCGCTGCCTG GCAACGTGCG
TCCAGGGAGG CGGCAGGCAA CCCGGCGCTG GCAGAGCGCT TGGGCAAACT GCCGATTCCG
GGCAGCCCGC TCGAAACGGC TGCCACACCA GTGCTGCTGA CGCGTGTGCA TAGCCCCTAT
GGCGAGCTGA GGTTCCTGTC CACGTTCACC ACCTTCGGCA TGCCGCTGGA TATCACGGTG
GAATCACTGC GCATCGAACA CCTGATCCCC GCCGACCCAC AGACCCGGCA GAGGATGCAG
GCGGCGTTCG AGCAATGGTC GGCCGTTACA GCGTGA
 
Protein sequence
MNQHLFHRNS PAPHTSAGQH LRHLRRQASL SQLDLALLAG LSQRHLSCVE TGRARASPST 
LHALLSALGA PLELCNEVFV AAGYAPRYAA SPLDAPELAL VHAAIEHILQ VNNPAPAIVI
DSNWDVIAAN TSTGLLLAMA GVTAQPATGL NLLQTLLCPG GLGDHLANAQ EIRSAAWQRA
SREAAGNPAL AERLGKLPIP GSPLETAATP VLLTRVHSPY GELRFLSTFT TFGMPLDITV
ESLRIEHLIP ADPQTRQRMQ AAFEQWSAVT A