Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3152 |
Symbol | |
ID | 5870937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3526688 |
End bp | 3527503 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641548268 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001669380 |
Protein GI | 167034149 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAGC ACCTGTTCCA TCGCAATAGC CCTGCCCCAC ATACTTCGGC AGGCCAGCAT CTACGCCACC TGCGTCGGCA GGCCAGCCTC AGCCAGCTGG ACCTGGCGCT GCTGGCGGGG CTGTCGCAGC GCCATCTGAG CTGCGTGGAG ACCGGCCGCG CCAGGGCCAG CCCGAGCACC TTGCATGCGC TGCTTTCGGC CCTTGGCGCG CCGTTGGAGC TGTGCAATGA AGTGTTCGTC GCTGCCGGCT ACGCGCCCCG CTACGCGGCC TCGCCACTCG ATGCGCCCGA GTTGGCGCTG GTGCATGCCG CCATTGAACA CATCCTGCAG GTCAACAACC CCGCACCTGC GATCGTCATC GACAGCAACT GGGACGTCAT CGCCGCCAAT ACCAGTACCG GGCTCTTGTT GGCGATGGCC GGCGTTACAG CACAGCCGGC CACAGGCCTC AACCTGCTGC AGACACTGCT CTGCCCCGGC GGCCTGGGCG ATCATCTGGC CAATGCGCAA GAAATTCGCA GCGCTGCCTG GCAACGTGCG TCCAGGGAGG CGGCAGGCAA CCCGGCGCTG GCAGAGCGCT TGGGCAAACT GCCGATTCCG GGCAGCCCGC TCGAAACGGC TGCCACACCA GTGCTGCTGA CGCGTGTGCA TAGCCCCTAT GGCGAGCTGA GGTTCCTGTC CACGTTCACC ACCTTCGGCA TGCCGCTGGA TATCACGGTG GAATCACTGC GCATCGAACA CCTGATCCCC GCCGACCCAC AGACCCGGCA GAGGATGCAG GCGGCGTTCG AGCAATGGTC GGCCGTTACA GCGTGA
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Protein sequence | MNQHLFHRNS PAPHTSAGQH LRHLRRQASL SQLDLALLAG LSQRHLSCVE TGRARASPST LHALLSALGA PLELCNEVFV AAGYAPRYAA SPLDAPELAL VHAAIEHILQ VNNPAPAIVI DSNWDVIAAN TSTGLLLAMA GVTAQPATGL NLLQTLLCPG GLGDHLANAQ EIRSAAWQRA SREAAGNPAL AERLGKLPIP GSPLETAATP VLLTRVHSPY GELRFLSTFT TFGMPLDITV ESLRIEHLIP ADPQTRQRMQ AAFEQWSAVT A
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