Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_3148 |
Symbol | |
ID | 5870933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 3524525 |
End bp | 3525442 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641548264 |
Product | hypothetical protein |
Protein accession | YP_001669376 |
Protein GI | 167034145 |
COG category | [S] Function unknown |
COG ID | [COG2326] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.664678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCA CAGAACACGC CTTGATGCGG CGCATCCACC GCGAACTGCT TGACCACAGC GATGAAGAAC TGGAGCTGGA ACTGGCCGAA GACGGCCATG ACCTGAATGC GCTGTTTGAT GAACATGTCG AGGATGGCAG CGAAAAAGCC GCACGCAGGA CTTACTTTCG CGAGCTGTTC CGCCTGCAAG GGGAATTGGT AAAGCTGCAA AGCTGGGTGG TCAAGACCGG CCACAAGGTG GTGATCCTGT TCGAGGGCCG TGACGCGGCT GGCAAAGGTG GCGTGATCAA GCGCATCACC CAGCGCCTCA ACCCCCGTGT CTGTCGGGTG GCCGCCCTGC CCGCCCCCAA TGATCGGGAA CGCACGCAAT GGTACTTCCA GCGTTATGTT CCGCATTTGC CGGCGGCAGG CGAAATCGTG CTGTTCGACC GCAGCTGGTA CAACCGTGCC GGCGTGGAAA AGGTCATGGG CTTTTGCAAC GACGACCAGT ACGAGGAGTT TTTCCGCACG GTACCGGAGT TCGAACGCAT GCTCGCCCGC TCAGGCATCC AGCTGATCAA GTACTGGTTT TCCATTTCCG ACCAGGAACA ACACCTGCGC TTTCTCAGCC GCCTGCACGA CCCGCTCAAG CAATGGAAGC TAAGCCCCAT GGACCTGGAG TCACGCCGGC GCTGGGAGGC CTACACCAAG GCCAAGGAAA TCATGCTCGA ACGCACCCAC ATCGCCGAGG CACCCTGGTG GGTGGTACAG GCCGACGACA AGAAAAAAGC CCGGCTCAAC TGCATCCACC ACCTGCTGGG GCAAATGCCT TATGAAGAAG TGGAGGTGCC GATGATCGAG CTGCCGCAAC GGGTCAGGAA GGAGGACTAC ATTCGCAACC CGACGCCGAT GGATATCATC GTGCCGCAGA TTTATTGA
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Protein sequence | MTATEHALMR RIHRELLDHS DEELELELAE DGHDLNALFD EHVEDGSEKA ARRTYFRELF RLQGELVKLQ SWVVKTGHKV VILFEGRDAA GKGGVIKRIT QRLNPRVCRV AALPAPNDRE RTQWYFQRYV PHLPAAGEIV LFDRSWYNRA GVEKVMGFCN DDQYEEFFRT VPEFERMLAR SGIQLIKYWF SISDQEQHLR FLSRLHDPLK QWKLSPMDLE SRRRWEAYTK AKEIMLERTH IAEAPWWVVQ ADDKKKARLN CIHHLLGQMP YEEVEVPMIE LPQRVRKEDY IRNPTPMDII VPQIY
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