| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3120 |
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| Symbol | |
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| ID | 5870905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 3493764 |
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| End bp | 3495428 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641548236 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001669348 |
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| Protein GI | 167034117 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0189072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.493238 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAGGC CCTCTGACGA GCAGCAACGG GCGCTGGCCG GGCTGCTGGG GCTGGGCGAC
CACTCGGCGC GCAAAAGCCA CTACCCGGAA CTTTCCGCCC GTCTGGACGA ACTGGAGGCT
GAACGCAACC GCTACAAGTG GCTGTTCGAA AACGCCGTGC ACGGGATTTT CCAGGCCAGC
CTGCAGGACG GCATGCGTGC CGCCAACCCG GCGCTGGCGC GCATGCTCGG TTACGACGAC
CCGCAAGCGG TATTGTTTTC CCTGACTGAC TTGGCCGCAC ACCTGTTTGA CGGCGGCACC
GAGGAGTTGC AGGCCATTAC CGCTATCCTC GCCCGCGAGC ACAGCCTGCA TGGCTACGAA
ACCCGTTTGC GGCGCAAGGA CGGCAGCCAC CTCGATGTGC TGATGAACCT GCTGCTCAAA
CCCGGCCAGG AGGGCATAGT AGAGGGGTTT GTCGCCGACA TCACCGAACG CAAACTGGCC
CAGCAGCGCC TGCAACAGCT CAATGACGAA CTGGAGCAGC GGGTTGCTGC GCGTACCGAT
GAATTACTGG AGGCGCGTGA TGCCGCAGAG GCGGCCAACC GCAGCAAGGA CAAATACCTC
GCCGCCGCCA GCCATGACCT GCTGCAACCG CTGAACGCTG CGCGCCTGCT GATCTCCACC
TTGCGCGAGC GGCCGTTGCC AGAGGCCGAG CATGTGTTGG TGGAGCGCAC CCACCAGGCC
CTGGAAGGCG CCGAAGACCT GCTGACCGAC CTGCTGGACA TTTCTCGGCT CGACCAGGCG
GCGGTCAAGC CGGACGTAGC CGTGTACCGC TTGGATGAGC TGTTCGCGCC GCTGGTCTCG
GAGTTCAGCT CGGTCGCCGA TGCTGCAGGC CTGAAGCTGC ATGCGCGCAT AGCCGACTAT
GCCATCTGCA CTGACCTGCG GTTGCTGACA CGTATCCTGC GCAACTTCCT CAGCAACGCG
TGCCGGTACA CCGACCAGGG GCGGATCCTG CTCGGCGCGA GGCGCCGCGG CGGCCATTTG
CGGCTGGAGG TGTGGGATTC CGGGCGGGGC ATTGCGCAGG ATCGGCTGCA GGCCATTTTT
CTCGAATTCA ACCAGCTGGA CGTTGGCCGC GCGGCGGATC GCAAGGGCGT GGGCCTGGGG
TTGGCGATCG TAGAACGGAT CGCCAAGATT CTCGGCTATC GGATCGAAGT GCGTTCGTGG
CCTGGGCGTG GCTCGATGTT CAGCATCGAA GTGCCGCTTG GTAAAGCGGT GCCCCTGGCC
GCTCACCAGG CCGTGCCGCT GCCAAGCGTC GGCAACCCGC TGCCGGGCCG CCGCCTGTTG
GTGCTGGACA ATGAGGTGAG CATCCTTGAA AGCATGGGCG CGCTGCTAGG GCAGTGGGGC
TGTGAAGTGG TAACCGCAAC CGACCAGGAA GGCGCCTTGC AGGCCTTGCA AGAGCGCGCT
CCAGAGCTGA TCCTGGCGGA TTTCCACCTG GACCATGGTG TGGTGGGCTG CGAGGTGGTC
AGGCACTTGC GTGAGCACTT TGCCGCGCCG ATACCGGCGG TGATCATCAC CGCCGACCGC
AGCGATCAAT GCCGGCGGGC CTTGCACAAG CTTGGCGCAC CACTGCTGAA CAAACCGGTA
AAACCGGGGA AGTTGCGCGC GGTGTTGAGC CAGTTGCTGG GGTAA
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| Protein sequence | MARPSDEQQR ALAGLLGLGD HSARKSHYPE LSARLDELEA ERNRYKWLFE NAVHGIFQAS
LQDGMRAANP ALARMLGYDD PQAVLFSLTD LAAHLFDGGT EELQAITAIL AREHSLHGYE
TRLRRKDGSH LDVLMNLLLK PGQEGIVEGF VADITERKLA QQRLQQLNDE LEQRVAARTD
ELLEARDAAE AANRSKDKYL AAASHDLLQP LNAARLLIST LRERPLPEAE HVLVERTHQA
LEGAEDLLTD LLDISRLDQA AVKPDVAVYR LDELFAPLVS EFSSVADAAG LKLHARIADY
AICTDLRLLT RILRNFLSNA CRYTDQGRIL LGARRRGGHL RLEVWDSGRG IAQDRLQAIF
LEFNQLDVGR AADRKGVGLG LAIVERIAKI LGYRIEVRSW PGRGSMFSIE VPLGKAVPLA
AHQAVPLPSV GNPLPGRRLL VLDNEVSILE SMGALLGQWG CEVVTATDQE GALQALQERA
PELILADFHL DHGVVGCEVV RHLREHFAAP IPAVIITADR SDQCRRALHK LGAPLLNKPV
KPGKLRAVLS QLLG
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