| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3109 |
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| Symbol | |
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| ID | 5870894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3477394 |
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| End bp | 3478116 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641548225 |
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| Product | putative proteasome-type protease |
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| Protein accession | YP_001669337 |
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| Protein GI | 167034106 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3484] Predicted proteasome-type protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTACT GCGTCGCCAT GCACCTGGAG GACGGGCTCG TCTTCATCAG CGACTCACGC
ACCAATGCCG GCATCGACCA GATCTCCACC TTTGCCAAGT TGTTCGTCTT CAGCGTGCCA
GGCGAGCGGC TGATCGTGCT GCAGACCGCC GGCAACCTGG CGACCTCGCA GTCCGTGGTC
AACCTGCTGC GCCAGCGTAC CCTGGGCAGC GGCCAGCACC TGCTGAACGT TGCCACGCTT
TTCGATGCCA CGGTGCTGGT TGCCGACACC CTGCGCGAAG TGGTCAGCCG TGACCGCAGC
AAACTCACCG CGGGCATCGA CCTGAGCAGT TCATTCATTG TCGGCGGCCA GATAGCCGCC
GGGCCCATGG CCATTTTCAA TGTCTACGCG CAGGGCAATT TCTTTCAGGC CACGCCGGAT
ACTCCGTTCC TGCAACTGGG TGAAAGCAAG TACGGCCGGC CCATACTCGA CCGCAACCTG
GATTACCGCA CGCCGCTCGA TGAAGCGTTG CGCTGTGGCC TGATTTCGTT CGACTCCACC
ATCCGCAGCA ACCTGTCGGT GGGCATGCCG CTGGACTTGC TGGTGTACCG CAAGAACAGC
CTGGAGAGCA TGACACGCAG GCGCATCAAC AGCGACGATG CCTATTACCA GCAAATTCGC
AAGCAATGGA GCGACGGGTT GAAGACACTC CTGGCTGAAC TGCCGGCGCC GCCTTATGGC
TGA
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| Protein sequence | MTYCVAMHLE DGLVFISDSR TNAGIDQIST FAKLFVFSVP GERLIVLQTA GNLATSQSVV
NLLRQRTLGS GQHLLNVATL FDATVLVADT LREVVSRDRS KLTAGIDLSS SFIVGGQIAA
GPMAIFNVYA QGNFFQATPD TPFLQLGESK YGRPILDRNL DYRTPLDEAL RCGLISFDST
IRSNLSVGMP LDLLVYRKNS LESMTRRRIN SDDAYYQQIR KQWSDGLKTL LAELPAPPYG
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