| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3102 |
|---|
| Symbol | |
|---|
| ID | 5870887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 3469268 |
|---|
| End bp | 3470776 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641548218 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_001669330 |
|---|
| Protein GI | 167034099 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACAACA AGGTTAAAGC CTACTTGCAG GCCTTTGGCG TTTCCGAGGC GACCCAGCGT
TTTCTCAGCA AGCCGCAGCG CATGTTCATC GGCGGTGCCT GGCTGGAGGC CAGCGACGGA
GGTACCGCCG AGGTCATCGA GCCCTCCACC GAAGGGGTAC TGACACGCAT CCCCATGGGC
ACCGCAGATG ACCTCGACCG TGCCGTGTGC GCCGCGCGCG CGCAGTTCGA CGGTGGTGCC
TGGCGCCAGC TGAAGCCGCT GGAGCGCGAG CGCCTGATTC ATCGCCTGGC CGACTTGATA
GAAACCCACG GCGACGAATT GGCGCAGATC GAAGCCATCG ACATGGGCAA GTCGGTGGTG
CAGGCGCGCG CAGTCGACAT CCAGGGCACG GTCGATACCC TGCGCTATTT CGCCGGCTGG
GCCAGCAAGA TCCACGGCCG CACGGTCGAG CCTTCGCTGC CTGGCAATTA CCTGGCGTAT
ACCCGCAAGG AGGCGGTGGG GGTGGTCGGC GCCATCGTGC CGTGGAACTT CCCCCTGCAG
ACCATGGCCT GGAAACTGGG CGCGGCGCTG GCCACCGGCT GCACCGTGGT GGTCAAACCG
GCGGAGCTGA CCTCGCTGTC GGCACTGCGC TTTGCCGAGC TGGTACAGGC GGCAGGTATT
CCCGATGGTG TGGTGAACAT CGTGACCGGG CGCGGCAGCG TGGTCGGCCA GGCGATGTCC
AGCCACCCAG GCATCGACAA GCTGAGCTTT ACCGGCTCTA CCCCAGTGGG GTGTGCGGTG
GGCAAGACGG CGATGGACCA GATGAAGCGC CTTACCCTCG AACTGGGTGG CAAGTCACCG
GTGATCGTGT TTGCCGACGC GGACATCGAG GCGGCGGCGC AAGCCGTGGC CAATGGGGTG
TTCTTCAACT CTGGGCAGGT GTGTGATGCC GGTACCCGTG CGTATGTAGA GCGCAGTGTC
TATCCGGCAT TTCTCGACGC GTTGGCACGC TACACGGCGA CGTTGAAGAT TGCCCCAGGG
CTTGACCCCG ATTGCTTCAT CAGCCCGATG GTGTCGCAGC AACAGCAGCG GCGCGTGCTG
GACTATATCG CCCTGGGTAA GGCCGAAGGC GCGCAGGTGC ACTATGGTGG CGAGCTGCTC
GACGGCCCCG GCTTCTACGT GCAGCCGACG ATCTTCGCCC ATTGCCGCAA TGACATGCGC
ATCGTCAGCG AGGAGATCTT CGGCCCTGTG CTGGTCACTC AGCCGTTCGA CAGCCAGGAG
GAGGCACTGC AGCTTGCCAA CGACTCGCTG TTTGGCCTGG CAGCGGCGAT CTACTCCAAC
GACCTGGGCA AGGTGCATGG GCTGATCCCG CAGCTTCGCG CCGGCACCGT ATACGTCAAT
GCCCACAGTA CCCTCGACCC GGCCATGCCG TTCGGTGGCT ACAAACAGTC CGGCTACGGC
AAGGACCTGG GCGCGGAACA ACTGGAGTTT CTGCTGGAGA CCAAGGCGGT GTGGATCACC
TTGCCCTGA
|
|---|
| Protein sequence | MDNKVKAYLQ AFGVSEATQR FLSKPQRMFI GGAWLEASDG GTAEVIEPST EGVLTRIPMG
TADDLDRAVC AARAQFDGGA WRQLKPLERE RLIHRLADLI ETHGDELAQI EAIDMGKSVV
QARAVDIQGT VDTLRYFAGW ASKIHGRTVE PSLPGNYLAY TRKEAVGVVG AIVPWNFPLQ
TMAWKLGAAL ATGCTVVVKP AELTSLSALR FAELVQAAGI PDGVVNIVTG RGSVVGQAMS
SHPGIDKLSF TGSTPVGCAV GKTAMDQMKR LTLELGGKSP VIVFADADIE AAAQAVANGV
FFNSGQVCDA GTRAYVERSV YPAFLDALAR YTATLKIAPG LDPDCFISPM VSQQQQRRVL
DYIALGKAEG AQVHYGGELL DGPGFYVQPT IFAHCRNDMR IVSEEIFGPV LVTQPFDSQE
EALQLANDSL FGLAAAIYSN DLGKVHGLIP QLRAGTVYVN AHSTLDPAMP FGGYKQSGYG
KDLGAEQLEF LLETKAVWIT LP
|
|---|
| |